Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1327 ATGTCCACCACCACCTACAGCGGGATAGGTGACCGTTCCGGGTCTGGCAATTCCAACAATTCTGGGTCTGAAGGAATTGTAATTGCTGTTGTCATAGTTGTGATTCTTGTGAAGATAGGTCTTTTCATTTGGTTAGTGCCCAAATGCATGAAAAGATTTCAGGTTATTCATTATTCAAAATCGTCGCTTAAAGAAGCAACAGACAAACAATTTATGACACTCACAATGGATAAATTTCTGAATGACATGGAAAGGGAGAAGCCAATAAGGTTCACTGATCAGCAGCTAAGGATTGCTACTGATAACTACTCTTTTCTTTTGGGGTCAGGAGGTTTTGGAGTTGTTTATAAAGGAAGTTTCAGCAACGGAACCATCGTAGCCGTGAAAGTTCTACGTGGGAGTTCTGACAAGAGAATTGATGAGCAGTTTATGGCAGAAGTGGGTACCATTGGAAAAGTCCATCATTTTAATCTAGTTCGTCTATATGGGTTTTGCTTCGAAAGACACTTGAGAGCACTGGTTTACGAGTACATGGTGAATGGTGCACTCGAGAAGTACCTGTTTCACGAAAACACAACCTTATCATTCGAAAAGCTTCATGAGATCGCAGTTGGTACTGCGAGAGGCATTGCTTACTTACATGAAGAGTGCCAACAGAGAATAATCCACTACGACATTAAACCGGGAAATATTCTCTTGGACAGAAACTTCTGTCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAACAGGGACAATACTCATATAAGCATGACTGGGGGCAGGGGGACTCCTGGTTATGCCGCACCTGAGCTTTGGTTGCCATTTCCTGTAACTCACAAGTGTGACGTTTACAGCTTCGGCATGCTGCTATTTGAAATCATTGGCAGGAGAAGAAACCATAACATTAACCTTCCAGAAAGTCAGGTGTGGTTTCCAATGTGGGTTTGGGAAAGATTTGATGCCGAAAATGTGGAGGATTTGATAAGTGCCTGTGGGATAGAGGATCAAAATAGGGAGATTGCAGAAAGAATTGTTAAGGTAGCTCTGTCATGTGTTCAGTATAAGCCAGAAGCAAGACCTATAATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCTGTTGAAGTTCCAAAACCTCTGAACCCATTTCAACACCTGATTGATTGGACTCCTCCTCCCACTGATCCGGTCCAAGCATCGCAGACCAATACCGATACAAGTATTTGTTCCGACTCTTCGGAGTTGGTAGCCAAATCTGTCCACGTAGTTGCCACGCCTGTTATGACCAAGTACGAGATTGAATTAGCCTCTGCCTAA 1320 0.4295 MSTTTYSGIGDRSGSGNSNNSGSEGIVIAVVIVVILVKIGLFIWLVPKCMKRFQVIHYSKSSLKEATDKQFMTLTMDKFLNDMEREKPIRFTDQQLRIATDNYSFLLGSGGFGVVYKGSFSNGTIVAVKVLRGSSDKRIDEQFMAEVGTIGKVHHFNLVRLYGFCFERHLRALVYEYMVNGALEKYLFHENTTLSFEKLHEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFCPKVADFGLAKLCNRDNTHISMTGGRGTPGYAAPELWLPFPVTHKCDVYSFGMLLFEIIGRRRNHNINLPESQVWFPMWVWERFDAENVEDLISACGIEDQNREIAERIVKVALSCVQYKPEARPIMSVVVKMLEGSVEVPKPLNPFQHLIDWTPPPTDPVQASQTNTDTSICSDSSELVAKSVHVVATPVMTKYEIELASA* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1327 439 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 437 IPR045874 GO:0004672
Gso15g1327 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Gso15g1327 439 Gene3D Transferase(Phosphotransferase) domain 1 178 379 - -
Gso15g1327 439 PANTHER PUTATIVE-RELATED 23 437 - -
Gso15g1327 439 SUPERFAMILY Protein kinase-like (PK-like) 91 406 IPR011009 -
Gso15g1327 439 Pfam Protein tyrosine and serine/threonine kinase 107 371 IPR001245 GO:0004672|GO:0006468
Gso15g1327 439 ProSitePatterns Protein kinases ATP-binding region signature. 107 129 IPR017441 GO:0005524
Gso15g1327 439 Gene3D Phosphorylase Kinase; domain 1 75 177 - -
Gso15g1327 439 ProSiteProfiles Protein kinase domain profile. 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1327 439 SMART serkin_6 103 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1327 Gso-Chr15 13837051 13838783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1327 90 395 Receptor kinase-like Gene Family AT5G38280 41.720 1.40e-78 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gso15g1327 PK_Tyr_Ser-Thr 8.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1327 - - gmx:100305451 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1327 15 13837051 13838783 Gso9g0471 9 4880900 4883273 GST