Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1326 ATGGATAGATTTCTGAATGAGATGGAAAGGGAGAAGCCAATCGGGTTCACTGTTGAGCAGTTAAGGATTGCAACTGATAATTACTCTTTGTTGGGGTCAGGAGGTTCCGGAGCAGTTTATAAAGGAAGTTTTAGTGATGGAACCAGCATAGCTGTGAAGGTTCTACGTGGGAGTTCTGAGAAGAGAATTATTGAGCAGTTTATGGCAGAAGTAGCTACTATTGGTAAAGTTCATCATTTCAATCTAGTTCGTCTACATGGATTTTGCTTTGAAAGTCACTTCAGAGGACTGGTTTATGAGTACATGGCGAATGACACACTTGAGAAGTACTTGTTTTGTAAAAGCATGTTCTTATCATTTGAAAAGCGTCATGAGATTGCAGTTGGCACACCAAGAGGCATCGCTTATTTACATGAAGAGTGCCAACAAAGAATAATCTATTATGACATCAAACCAGGAAATATTCTCTTGGACTGGAACTTCTGTCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAATAGGGACAATGCTCATATAACCCTGACCCGGGGGACTCCTGGTTTTGCTGCACCTGAACTTTGGATGCCTAATTTTCCTGTAACTCACAAGTATGATGTTTACAGCTTTGGCATGCTGTTATTTGAAATCATTGGCAGGAGAAGAAACCATAACATTAACCTTCCAGAAAGTCAGGTATGGTTTCCAATGTGGGTTTGGAAAAGATTTGATGCTGAACAAGTGAGGGATTTGATAACAGCCTGTGGGATAGAGGATCAAAATTGCGAGATTGCAGAAAGATTTGTTAGGGTAGCTCTGTCATGTGTTCAGTATAGGCTAGAATCAAGACCTATAATGAGTGTTGTGGTGAAAATGTTGGGAGGTTTTATTGAAGTTCCAAAGCCTATGAACCCATTTCCGCACCTGGTTGATTGGTCTTCCCCCACTCATCTTGTCCAAGCGTCGCAGATCAATGCTGATAAAAGTATTTGTTTCGACTCTTCAGTAATGTTAACCAAATCTGTCCATGTAATTACCACTCCTATTTTGACCAAGTACGAGATCTACCTAAAAAAGTTTCAATGA 1089 0.4031 MDRFLNEMEREKPIGFTVEQLRIATDNYSLLGSGGSGAVYKGSFSDGTSIAVKVLRGSSEKRIIEQFMAEVATIGKVHHFNLVRLHGFCFESHFRGLVYEYMANDTLEKYLFCKSMFLSFEKRHEIAVGTPRGIAYLHEECQQRIIYYDIKPGNILLDWNFCPKVADFGLAKLCNRDNAHITLTRGTPGFAAPELWMPNFPVTHKYDVYSFGMLLFEIIGRRRNHNINLPESQVWFPMWVWKRFDAEQVRDLITACGIEDQNCEIAERFVRVALSCVQYRLESRPIMSVVVKMLGGFIEVPKPMNPFPHLVDWSSPTHLVQASQINADKSICFDSSVMLTKSVHVITTPILTKYEIYLKKFQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1326 362 SUPERFAMILY Protein kinase-like (PK-like) 12 294 IPR011009 -
Gso15g1326 362 Pfam Protein kinase domain 29 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1326 362 Gene3D Transferase(Phosphotransferase) domain 1 102 302 - -
Gso15g1326 362 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 355 IPR045874 GO:0004672
Gso15g1326 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Gso15g1326 362 ProSitePatterns Protein kinases ATP-binding region signature. 31 53 IPR017441 GO:0005524
Gso15g1326 362 PANTHER PUTATIVE-RELATED 1 355 - -
Gso15g1326 362 Gene3D Phosphorylase Kinase; domain 1 3 101 - -
Gso15g1326 362 ProSiteProfiles Protein kinase domain profile. 25 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1326 362 SMART serkin_6 25 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1326 Gso-Chr15 13822262 13823817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1326 16 307 Receptor kinase-like Gene Family AT5G38280 40.066 2.36e-68 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gso15g1326 Pkinase 1.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1326 - - gmx:100818128 725.317