Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1321 ATGTCAGACAACAACTCTCCTGAAACAAAGTATGATGTTTTTGTTAGCTTCAGGGGCAAGGACATCCGTGACGGGTTTCTTAGCCATTTGACTGACACTTTTCTAAGGAAGAAAATAAATGTCTTTGTAGATGAGACAAATCTTAAAAAGGGAGATGAAATATGGCCATCACTTGCCGTAGCAATTGAAGTATCATCCATTTCATTGATCATATTCTCACAAGACTATGCTTCTTCGCGTTGGTGTTTAGAAGAACTTGTGAAAATACTCGAATGCAGAGAGAAATATGGACGAATTGTAATACCTATTTTCTACCACGTACAACCCAAAAATGTACGACATCAGTTGGGGAGTTACGAAAATATATTTGCTCAGCGTGGAAGAAAATACAAGACCAAGGTGCAAATCTGGAAAGATGCGTTGAACATATCCGCTGATTTATCTGGAGTTGAATCATCAAGATTTCAAAATGATGCTGAGCTGATTCAAGAAATTGTCAATGTTGTGCTAAACAAGTTGGCGAAACCATCAGTTAATTCAAAAGGAATTGTGGGAATTGATGAAGAAATTGCAAATGTAGAATTATTGATAAGCAAAGAGCCAAAAAAAACCCGTCTTATTGGAATTTGGGGTATGGGCGGTATCGGGAAGTCAACCCTCGCAGAAAAAGTACTTAATAAATTACGGTCTGGATTCGAAGGCTGTTATTTTTTAGCCAATGAAAGAGAACAATCAAACAGGCATGGATTGATTTCTTTGAAGGAAAAAATATTTTCTGAACTATTAGGATATGATGTAAAAATTGACACTCTGTATTCGTTGCCTGAAGATATTGTCAGAAGAATTAGTTGTATGAAGGTTCTTCTTATTCTTGATGATGTAAATGATTTAGATCACCTTGAAAAATTACTAGGAACTCTTGACAATTTTGGCTCAGGGAGTAGAATAATTGTCACAACTAGAGATGAGCAGGTACTTAAAGCCAACAAAGTTGATGAGATTTACCGGCTTAGAGAATTCAATCATGATAAAGCACTGGAATTTTTCAACTTGAATACCTTTAACCAAAGTGATGATCAAAGGGAGTATAGTACACTATCAGAAAAGGTTGTTGATTATGCCCGAGGCATTCCATTAGTTCTTAAAGTTCTAGCTCATCTTCTGCGAGGGAGAAAAAAGGAAATATGGGAAAGTGAGCTAGACAAGCTTAGAAGGATGCCTCCTACCACTGTTTATGATGCAATGAAGCTGAGTTATGATGATCTAGATCGTAAAGAGCAACAACTTTTTCTAGATCTAGCATGTTTCTTTCTTAGATCACATATAATAGTAAACGTGAGCAATGTAAAATCTTTATTGAAAGATGGTGAAAGTGATAATTCAGTGGTTGTTGGGTTGGAAAGGTTGAAAGATAAAGCTCTTATAACTATCTCCGAGGATAATTGTATATCTATGCATGATTGTTTACAAGAAATGGCCTGGGAGATTGTTCGTCGCGAAGACCCTGAAAGTCGTAGTTGGTTGTGGGATCCAAATGATGACATTTATGAAGCATTGGAAAATGACAAGTGTACTGAGGCCATTAGAAGCATACGAATTCACTTGCCAACATTTAAGAAGCATAAGTTATGCCGTCACATATTTGCAAAGATGAGAAGACTACAGTTTTTGGAAACTTCTGGGGAATATAGATATAATTTCGATTGCTTCGATCAACATGATATTCTTGCTGAAGGACTTCAATTTTTGGCAACTGAACTAAAATTTCTTTGTTGGTACTATTACCCTCTAAAATTGTTGCCAGAGAATTTTTCTCCCGAGAAACTTGTTATATTGAATATGCCAGGGGGCAGAATTGAAAAACTTTGGCATGGAGTTAAGAATTTGGTGAATTTAAAACAACTTGACCTCGGTTGGTCCCAGATGTTAAAGGAGCTGCCAGATTTATCAAAAGCCAGAAATCTTGAAGTACTGCTTCTGGGGGGTTGTTCTATGTTGAGTAGTGTGCATCCGTCTATTTTCTCTCTGCCCAAACTTGAGAAATTAGACCTTTGGAATTGCCGGTCCCTCACCAGACTTGCAAGTGATTGTCACTTATGCAGCCTCTGTTATCTCAACCTTGATTATTGCAAGAATCTTACAGAATTCTCTCTGATTTCAGAGAATATGAAAGAATTGGGATTACGATTTACAAAGGTCAAAGCACTTCCCTCAACCTTTGGATGTCAAAGCAAGCTTAAATCGCTACATCTAAAAGGAAGTGCCATTGAGAGATTACCTGCATCTATCAACAATCTTACACAACTGCTACATCTAGAGGTAAGTCGTTGCAGGAAGCTTCAAACAATAGCAGAGCTTCCCATGTTCCTTGAAACTCTAGATGTCTATTTTTGCACTTCACTTCGGACTCTACAAGAGCTTCCCCCTTTCCTTAAAACTCTAAATGTCAAAGATTGCAAATCACTTCAGACTCTAGCAGAGCTACCCCTTTCCCTTAAAACTCTAAATGTCAAAGAATGCAAATCACTTCAGACACTACCCAAGCTTCCCCCGCTCCTTGAAACTCTATATGTCCGAAAATGCACATCACTTCAGACTCTGCCAGAGCTTCCCTGTTTCGTTAAAACTTTATATGCCATATACTGCACATCATTGAAGACTGTATTGTTCCCTTCAACTGCTGTTGAACAATTAAAGGAAAACAGGACACGGGTTCTGTTCTTGAATTGCTTGAAGTTGGATGAACATTCTCTAGAGGCTATTGGGTTGACTGCGCAAATCAATGTGATGAAATTTGCAAACCAGCACCTATCTACACCAAATCACGATCATGTTGAAAATTACAATGATTACGATTATGGTGATAATCATCATTCTTATCAAGCTGTATACCTATATCCAGGAAGCAGTGTTCCAGAGTGGATGGAGTACAAGACAACCAAGGATTATATAAATATTGATCTCTCTTCTGCACCATATTCCCCCCTGCTCAGCTTCATTTTCTGCTTCGTCCTTGATAAGTACCGGGACACAGCACTGATTGAAAGATTTTATGTTAACATCACTGTAAATGATGGTGAGGGTGAACGTAAAAAGGACAGTGTCAGAATGCACATAGGTTATTTGGATTCAACAATTGAATCAAATCATGTGTGTGTGATGTATGACCAAAGATGTTCTCACTTCCTAAATAGCAGAGCCAAAAATCAAACAAGGCTTAGAATTGAGGTTTCAATGGGGGTACGAATCTTCTATTATGAAACTTATAAACCACTGCAGCGGGTGTTGAAAGGATTTGGGGTCAGTCTAATCAGCAGCTGA 3321 0.3794 MSDNNSPETKYDVFVSFRGKDIRDGFLSHLTDTFLRKKINVFVDETNLKKGDEIWPSLAVAIEVSSISLIIFSQDYASSRWCLEELVKILECREKYGRIVIPIFYHVQPKNVRHQLGSYENIFAQRGRKYKTKVQIWKDALNISADLSGVESSRFQNDAELIQEIVNVVLNKLAKPSVNSKGIVGIDEEIANVELLISKEPKKTRLIGIWGMGGIGKSTLAEKVLNKLRSGFEGCYFLANEREQSNRHGLISLKEKIFSELLGYDVKIDTLYSLPEDIVRRISCMKVLLILDDVNDLDHLEKLLGTLDNFGSGSRIIVTTRDEQVLKANKVDEIYRLREFNHDKALEFFNLNTFNQSDDQREYSTLSEKVVDYARGIPLVLKVLAHLLRGRKKEIWESELDKLRRMPPTTVYDAMKLSYDDLDRKEQQLFLDLACFFLRSHIIVNVSNVKSLLKDGESDNSVVVGLERLKDKALITISEDNCISMHDCLQEMAWEIVRREDPESRSWLWDPNDDIYEALENDKCTEAIRSIRIHLPTFKKHKLCRHIFAKMRRLQFLETSGEYRYNFDCFDQHDILAEGLQFLATELKFLCWYYYPLKLLPENFSPEKLVILNMPGGRIEKLWHGVKNLVNLKQLDLGWSQMLKELPDLSKARNLEVLLLGGCSMLSSVHPSIFSLPKLEKLDLWNCRSLTRLASDCHLCSLCYLNLDYCKNLTEFSLISENMKELGLRFTKVKALPSTFGCQSKLKSLHLKGSAIERLPASINNLTQLLHLEVSRCRKLQTIAELPMFLETLDVYFCTSLRTLQELPPFLKTLNVKDCKSLQTLAELPLSLKTLNVKECKSLQTLPKLPPLLETLYVRKCTSLQTLPELPCFVKTLYAIYCTSLKTVLFPSTAVEQLKENRTRVLFLNCLKLDEHSLEAIGLTAQINVMKFANQHLSTPNHDHVENYNDYDYGDNHHSYQAVYLYPGSSVPEWMEYKTTKDYINIDLSSAPYSPLLSFIFCFVLDKYRDTALIERFYVNITVNDGEGERKKDSVRMHIGYLDSTIESNHVCVMYDQRCSHFLNSRAKNQTRLRIEVSMGVRIFYYETYKPLQRVLKGFGVSLISS* 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1321 1106 SUPERFAMILY L domain-like 538 887 - -
Gso15g1321 1106 SMART LRR_bac_2 808 828 - -
Gso15g1321 1106 SMART LRR_bac_2 850 870 - -
Gso15g1321 1106 SMART LRR_bac_2 829 849 - -
Gso15g1321 1106 ProSiteProfiles TIR domain profile. 9 173 IPR000157 GO:0007165
Gso15g1321 1106 Pfam TIR domain 10 175 IPR000157 GO:0007165
Gso15g1321 1106 PRINTS Disease resistance protein signature 206 221 - -
Gso15g1321 1106 PRINTS Disease resistance protein signature 281 295 - -
Gso15g1321 1106 PRINTS Disease resistance protein signature 374 388 - -
Gso15g1321 1106 PRINTS Disease resistance protein signature 674 690 - -
Gso15g1321 1106 SUPERFAMILY "Winged helix" DNA-binding domain 410 513 IPR036390 -
Gso15g1321 1106 SMART till_3 10 147 IPR000157 GO:0007165
Gso15g1321 1106 Gene3D - 340 423 IPR042197 -
Gso15g1321 1106 Gene3D Ribonuclease Inhibitor 721 805 IPR032675 -
Gso15g1321 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 433 IPR027417 -
Gso15g1321 1106 Gene3D Ribonuclease Inhibitor 809 904 IPR032675 -
Gso15g1321 1106 Gene3D Ribonuclease Inhibitor 540 720 IPR032675 -
Gso15g1321 1106 Pfam NB-ARC domain 196 405 IPR002182 GO:0043531
Gso15g1321 1106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 803 IPR044974 GO:0006952
Gso15g1321 1106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 831 1106 IPR044974 GO:0006952
Gso15g1321 1106 Pfam C-JID domain 966 1086 IPR045344 -
Gso15g1321 1106 Gene3D - 8 170 IPR035897 -
Gso15g1321 1106 Gene3D - 171 334 IPR027417 -
Gso15g1321 1106 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 831 1106 - -
Gso15g1321 1106 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 7 803 - -
Gso15g1321 1106 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 149 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1321 Gso-Chr15 13742425 13748795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1321 6 818 WRKY Transcription Factor Family AT4G12020 32.005 1.41e-90 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1321 - - gmx:100817068 2210.26