Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1302 ATGGTCTTCTCAACTGTCTTTCTCGATGAAGATGACCCCTTTTTTTCTAGAAAAAGGCCAAGAGTGTCAGATCTTGGACATCAAGATGATTTACTTGCTGATGCAGGAATTTCCAGTGATATTTCCTTGTTCTCGCATCAAGATATAGAAAGGGGTACTGGTGATTTTCCCTCTTCCAGCAATACTGATGATAAAGTTGATCCAGATTCTGGAATGGAGATGAGCTGCCCATCAAATGTTAATAGTGGCTATGTTCCTGTGTGTTCTACCACAGGGCATATTTTGCACATGGACCAGAGTTTCTGTGGCTATGTGCAACAACCTGCTTTTGTGAGTGGATGGATGTATGTGAATGAAAATGGGCAAATGTGTGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTTCTGGTTTCTTGCCATCTGAACTTCCTGTGTATCCAGTGATTAATGGCACAATAATGAACCCTGTACCACTGAATTACTTCAAGCAGTTCCCTGATCATGTTTCCACTGGGTTTGCATATCTGAGCTTGGGTATCTCAGGCACAAGGGTGCCTACATTGGCAGTATATGAGCAAGATAGGTTTTTTGAGCATGCTGCTCCTCTGGCTGTTAATCCTGATTCACAGCCAGTTTCAAAGTCGCACATCAATTACTGCATTAAGGAATCCAATCGCTTAAATTCAAACTCAGAGGCATTCAAAAGTTTAATATCTTGTCAGATGTTAGGTGTAGAATGCTGTTGGCTTTATGAGGATGAGAAGGGTATGAAACATGGGCCACATTCTATTAAGGAATTGATATCCTGGCATCGTCATGGATATCTTAAAGATTCAACAGTGATCTCTCATTCTGACAATAAGTATGACACCTTTGTGCTATTGTCTGCTGTAAATACATTAAAAGGAGATATCTCTGGAACCATTTGTAGATCAGTTTCCACAAGTAGCGAGGTTGGTGAAATGGTAAACTTAATTGGTGAAATATCTGAGGACATTTCTTCCCAATTGCACATGGGTATCATGAAAGCTGCTCGCAGAGTTGTGCTAGATGGAATTATTGGTGATATCATTGCAGAATTTGTTACAGAAAAGAAACTTAAGAGGCATAAGCTTGAATCAGCTGACTGTACTCCTGAAAACAATATGTCTAAGTTTTCTGCTGAGATTAGTAAAGGTTCTGCTATTTCCAGTGATCCTGCATCTTCCCACACTTTGGACTATCAGACTTGTCATGAAAGTTCCAGATTGCCCCCAGCCATTATTAAATCAGTTGGAAGCATTGAAAATTTTTGGTGGTCATTTGCTGTGGTTCGCAAGGTACTTCTTGATTATTCCATGCAAGTCATGTGGAATGCAGTGTTTTTTGACACACTAGCAGAATACTTATCTTCCTGGAGGAAAAAGATGCTTTGGTCTCATCCTAAGCCTCAACCATCTGCTAATGGATGTGAAGATCATACTGAAAAGATTGAATCAGAAGCTTTGGTTTTCAATCCAGATTCTTCTGAAAGCAATGTTGATGGCGATAATCAGTTTGGAGTACTGACAACCGAAAAAAATTGTCCCCTGTTATTTTCATCTCCCAGTAGCCTCAAAGGTGGAAATTTACTAGAAGGTCAAAAAGTTTCATGCCCTTATGTTAACTCTAGAGATTTGACTTGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTTCTCTTCAAAGGTGTCTTTAGCTGATTACATTCGAAGTTTTGTTGAAAAGGAAGTGAACAAATTAATTCCTTTCCCAGAAGAAAACAAATTTAATGAGGTTGCTGTCGGTGGCACTCATTTTTCAGGGATACTTGCGGATAAAACGTCTATGAAGGAAATTCTAAATGACAAGTCAGTGGATCCTGTAAAGGCTGGAAATTCTTTTGGCGAGTCTGCATCTGGAAACCATAAGTCTGACATATTTTCGAAAGCATTTAAGGAGTTGTGTGGATATGTAGATGATGTGGTTGAAGAGGAGATTGATGACCTACCACCCGGGCTTGAGAAATCTCAAACAGTTGTCCCTCACTATAATTCGAAATTTCGACCTTCAAGGTCGGCTGAAAGTAATCCTAAGATAACAGAATATGTTGCTACAGCACTGTGCCGACAGAAACTGCATGATGAAGTTCTGGAAAAGTGGAGGTTGTTGTTTCTTAATTCTGTGCCCAAGCAAGTTTTTATATCATCAAGTACTGTAAAGAAACATTTTAAGTCTGATGGTCATAAGAAAAGAAAAATGGCCGATGCAAGCAAGGAACATTTGAATAGTGCTACCTCTGGACTGGGAAGAGTGAAGGAAGGAGCAAAGAGTTCTTCTGAAGTTCCGCCGGTGATTGGAAAGTATACCTATTGCCGCAAGAAGCTCTCGCAGAAGGAGTTAATTTTCTCAAAATCTGTAGCAGAAAATGATTCTAGGACAGGGAAGCAGCTTGTGACCAAGTTAAGGAAACATGTTTCTGGAGATGTTGGTGAGGCTGCAGAGGTTAAAATAGCTTCTGCTAAACATGGAAAGACAAAGATGATTAAAGGGAAGAAGGATACATCTTCTAAGGGCAAATCTTCTGTCAGTGTCAATAGTAGCTCACACAATGATCAATTATCTTTAAAGAATAAAGCTGGTCGAAAAGTGTTGAAGTTTTCAGATGATGTTAAGGATTTTGTAAAATCCAATGTAAAGAAGCTTTCAGTGTCAACTAATAATAGTGTTGGCATGAAGAAGGTTGCCAAAAGTGATGGCTGTGATCGTGATGACACTGTTAAAGAGAAGACCACAAGTCATTGCTCCAGAGAGATACAAAATGCAACAAAGAAAGTAACAAAATCAAAAAGGAAACATCAAATGGATGGTACATCTTCACATCCTACAAAGGTTTTGAAAATTTCAAATGGTGGTGCTTATCTGGGAGCCAGTAAACAAGTTCCTGTGGCAAGTAGGAAGTCTGCTAAATCCAAGCCATTGAATTTATGTCCTAGATCTGATGGCTGTGCCAGGACTTCTATTGATGGTTGGGAATGGCATAAATGGTCTCGAAGTGCCAGTCCTGCATATAAAGCACGTGTTAGGGGTCTTCCATGTGTCCGGAACAAGTGCATAGATTCTGAAAATAATTTATTTCAGTTGTCAAATGGTAAGGGTCTTTCTGCAAGAACAAATAGGGTGAAATTGCGTAACCTTCTTGCTGCTGCAGAGGGTGCAGATCTTCTGAAAGTGCCTCAACTGAAGGCACGGAAGAAGCATTTGCGTTTTCAAAGGAGCAAGATCCATGACTGGGGTCTTGTTGCCTTGGAGCCAATTGAGGCAGAGGATTTTGTGATTGAATATATTGGAGAACTAATTCGTCCTCGGATATCTGATATACGTGAACGCCAGTATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCTACCAAGAGAGGTGGGATTGCAAGATTTATTAACCACTCTTGTGAGCCCAACTGCTATACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCGAAACGGCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAGTTCCCCTTGGAGGAGAAAAAGATTCCCTGTAACTGTGGTTCCAGAAAGTGTCGTGGATCACTGAATTAG 3681 0.3996 MVFSTVFLDEDDPFFSRKRPRVSDLGHQDDLLADAGISSDISLFSHQDIERGTGDFPSSSNTDDKVDPDSGMEMSCPSNVNSGYVPVCSTTGHILHMDQSFCGYVQQPAFVSGWMYVNENGQMCGPYIKEQLYEGLTSGFLPSELPVYPVINGTIMNPVPLNYFKQFPDHVSTGFAYLSLGISGTRVPTLAVYEQDRFFEHAAPLAVNPDSQPVSKSHINYCIKESNRLNSNSEAFKSLISCQMLGVECCWLYEDEKGMKHGPHSIKELISWHRHGYLKDSTVISHSDNKYDTFVLLSAVNTLKGDISGTICRSVSTSSEVGEMVNLIGEISEDISSQLHMGIMKAARRVVLDGIIGDIIAEFVTEKKLKRHKLESADCTPENNMSKFSAEISKGSAISSDPASSHTLDYQTCHESSRLPPAIIKSVGSIENFWWSFAVVRKVLLDYSMQVMWNAVFFDTLAEYLSSWRKKMLWSHPKPQPSANGCEDHTEKIESEALVFNPDSSESNVDGDNQFGVLTTEKNCPLLFSSPSSLKGGNLLEGQKVSCPYVNSRDLTCILESVENELHFSSKVSLADYIRSFVEKEVNKLIPFPEENKFNEVAVGGTHFSGILADKTSMKEILNDKSVDPVKAGNSFGESASGNHKSDIFSKAFKELCGYVDDVVEEEIDDLPPGLEKSQTVVPHYNSKFRPSRSAESNPKITEYVATALCRQKLHDEVLEKWRLLFLNSVPKQVFISSSTVKKHFKSDGHKKRKMADASKEHLNSATSGLGRVKEGAKSSSEVPPVIGKYTYCRKKLSQKELIFSKSVAENDSRTGKQLVTKLRKHVSGDVGEAAEVKIASAKHGKTKMIKGKKDTSSKGKSSVSVNSSSHNDQLSLKNKAGRKVLKFSDDVKDFVKSNVKKLSVSTNNSVGMKKVAKSDGCDRDDTVKEKTTSHCSREIQNATKKVTKSKRKHQMDGTSSHPTKVLKISNGGAYLGASKQVPVASRKSAKSKPLNLCPRSDGCARTSIDGWEWHKWSRSASPAYKARVRGLPCVRNKCIDSENNLFQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKHLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEEKKIPCNCGSRKCRGSLN* 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1302 1226 MobiDBLite consensus disorder prediction 50 65 - -
Gso15g1302 1226 Gene3D - 241 324 IPR035445 -
Gso15g1302 1226 Gene3D - 104 174 IPR035445 -
Gso15g1302 1226 SMART set_7 1087 1210 IPR001214 GO:0005515
Gso15g1302 1226 SMART PostSET_3 1210 1226 IPR003616 -
Gso15g1302 1226 MobiDBLite consensus disorder prediction 50 73 - -
Gso15g1302 1226 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 55 1226 - -
Gso15g1302 1226 MobiDBLite consensus disorder prediction 747 781 - -
Gso15g1302 1226 SUPERFAMILY SET domain 1082 1223 IPR046341 -
Gso15g1302 1226 CDD SET_SETD1 1075 1222 - -
Gso15g1302 1226 ProSiteProfiles Post-SET domain profile. 1210 1226 IPR003616 -
Gso15g1302 1226 Pfam SET domain 1099 1203 IPR001214 GO:0005515
Gso15g1302 1226 Gene3D SET domain 1030 1226 IPR046341 -
Gso15g1302 1226 ProSiteProfiles SET domain profile. 1087 1204 IPR001214 GO:0005515
Gso15g1302 1226 MobiDBLite consensus disorder prediction 943 966 - -
Gso15g1302 1226 ProSiteProfiles GYF domain profile. 248 304 IPR003169 GO:0005515
Gso15g1302 1226 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 55 1226 IPR044570 GO:0042800|GO:0051568
Gso15g1302 1226 SUPERFAMILY GYF domain 246 301 IPR035445 -
Gso15g1302 1226 MobiDBLite consensus disorder prediction 842 878 - -
Gso15g1302 1226 MobiDBLite consensus disorder prediction 859 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1302 Gso-Chr15 13368671 13393627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1302 1078 1226 C2H2 Transcription Factor Family AT2G23740 38.012 7.34e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso15g1302 SET 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1302 - - gmx:100806034 2424.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1302 15 13368671 13393627 Gso9g0446 9 4466852 4484564 GST