Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1281 ATGAAAGAAGAAACAATGAGAATTTCAACGCTTGCAATTGTGATCCTTTTGTTCTTTTCTTTTGCACTACTACTTTGTCATGGCAATGAGAGCACTATGAGAGTGCTTTTGGAAGTAAAAACATCGTTCACTGAAGACCCAGAAAATGTTCTAAGTGATTGGTCAGTGAACAACACAGATTACTGTAGTTGGAGAGGGGTGTCATGTGGGTCAAAATCCAAACCTTTGGATCATGATGACTCGGTGGTGGGACTCAACCTGTCCGAGTTATCACTCAGTGGGTCAATATCACCCTCACTCGGCCGTTTGAAAAACCTAATCCACCTTGATCTCTCTTCTAACCGCCTCAGTGGTCCCATTCCACCAACCCTCTCCAACCTCACTTCGTTGGAATCTCTCTTACTCCACTCTAACCAACTCACGGGTCACATCCCCACCGAGTTCGACTCGCTGATGAGTCTCCGAGTCCTGCGAATCGGTAACAACAAACTCACTGGCCCGATTCCCGCGTCATTTGGGTTTATGGTCAACCTCGAGTACATTGGCTTAGCCTCATGCAGACTCGCCGGTCCGATTCCGTCCGAACTCGGTCGACTCAGTTTGTTGCAATATCTGATTCTGCAGGAAAACGAGTTGACTGGGCGGATTCCGCCCGAATTGGGGTACTGCTGGAGCCTTCAAGTCTTCTCCGCCGCTGGCAACAGACTCAATGACTCGATCCCGAGTACACTGAGTCGACTCGATAAGCTTCAAACTCTCAACCTTGCCAACAACAGCTTAACCGGGTCGATTCCGAGTCAACTCGGCGAGCTAAGTCAACTTCGATATATGAATGTCATGGGGAACAAGCTCGAGGGTCGTATTCCACCTTCTTTGGCTCAATTGGGTAACCTTCAAAATCTTGACTTGTCAAGGAATTTGCTCAGTGGGGAAATTCCAGAGGAGTTAGGGAACATGGGTGAGTTGCAATACTTGGTTCTCTCTGAGAACAAACTTTCTGGGACAATTCCAAGAACCATATGTTCCAATGCTACAAGTTTGGAGAATTTAATGATGTCAGGTAGTGGAATTCATGGTGAGATACCAGCTGAGTTGGGTCGGTGCCACTCACTGAAGCAACTTGATTTGTCAAACAATTTTCTCAATGGGTCAATACCTATTGAGGTTTATGGGTTGTTGGGGCTAACTGATCTATTGCTTCAAACCAACACTTTGGTTGGTTCAATCTCTCCCTTCATAGGGAACCTCACTAACATGCAGACACTTGCATTGTTTCACAACAATTTGCAGGGTGATCTCCCCAGAGAGGTTGGGAGGCTTGGGAAATTGGAGATAATGTTTCTCTATGATAACATGTTGTCAGGGAAGATTCCTTTGGAGATTGGTAACTGTTCAAGCTTGCAAATGGTTGATTTGTTTGGAAACCATTTCAGTGGGAGAATTCCCTTGACTATTGGGAGGCTGAAAGAGTTGAATTTCTTTCACCTTAGGCAGAATGGGCTTGTGGGTGAGATTCCTGCCACACTTGGGAACTGTCACAAGCTGAGTGTGCTTGATTTGGCAGATAATAAGCTCTCAGGTAGCATTCCTTCTACATTTGGATTCCTCAGGGAGTTGAAGCAGTTCATGCTCTACAACAATTCTCTTGAAGGTAGTCTTCCTCACCAACTTGTAAATGTAGCAAACATGACCAGAGTGAACCTTTCAAACAACACACTGAATGGTAGTTTGGCTGCATTGTGTAGCTCTAGGTCTTTTCTTTCTTTTGATGTCACAGATAATGAATTTGATGGTGAAATACCCTTTCTCCTGGGAAATTCACCCTCCCTTGAGAGGCTGAGATTAGGTAACAACAAATTTTCTGGTGAAATTCCAAGGACATTGGGAAAAATCACTATGTTATCGTTGTTAGATCTCTCAAGAAATTCACTCACAGGACCAATACCAGATGAGCTTTCTTTGTGTAATAATCTGACTCACATTGATTTAAACAATAACCTTCTATCTGGACACATACCATCATGGCTTGGGAGTTTGCCTCAGTTGGGAGAGGTTAAGCTCTCCTTCAATCAATTTTCTGGTTCTGTTCCACTAGGCCTATTCAAACAACCCCAGTTGCTGGTCCTTTCCTTGAATAACAATTCTCTTAATGGAAGTCTCCCAGGTGATATTGGTGATCTTGCATCTCTTGGTATCCTCAGGCTCGACCATAATAATTTCTCTGGACCAATCCCTCGCTCAATTGGTAAATTGAGCAATCTTTATGAGATGCAGCTATCGAGGAATGGCTTTAGTGGTGAAATACCATTTGAGATTGGAAGTCTCCAAAATCTCCAAATCAGTTTGGACCTCAGTTACAATAATCTATCTGGTCATATCCCATCTACACTCGGCATGCTGTCAAAATTGGAAGTACTTGATCTTTCTCACAATCAACTCACTGGAGAAGTGCCTTCAATAGTGGGTGAAATGAGGAGCTTGGGGAAGCTTGACATTTCTTACAATAACCTTCAAGGCGCATTGGATAAGCAATTTTCCCGCTGGCCACACGAGGCGTTCGAAGGAAATCTTCTTTGTGGAGCCTCTCTTGTAAGCTGCAACAGTGGTGGTGATAAGCGAGCGGTCTTAAGCAACACATCAGTGGTTATAGTCTCTGCACTTTCAACTTTAGCTGCAATTGCTCTACTGATACTTGTAGTGATCATCTTCTTGAAAAACAAGCAAGAATTTTTCAGGAGAGGCAGTGAATTGAGTTTTGTGTTCTCCTCTTCATCACGAGCACAGAAGCGGACATTGATCCCCCTAACTGTGCCAGGAAAGCGAGATTTCAGGTGGGAAGATATCATGGATGCCACAAACAATCTAAGTGAAGAGTTCATAATTGGTTGTGGAGGTTCTGGGACAGTGTACAGAGTTGAATTTCCCACTGGAGAGACCGTGGCTGTCAAGAAGATTTCGTGGAAAAATGATTATCTGTTGCACAAAAGCTTTATAAGAGAACTTAAGACTTTAGGGAGGATCAAGCACAGGCATCTGGTGAAATTGTTAGGTTGTTGTAGCAATAGATTTAATGGAGGAGGTTGGAATCTGCTGATATATGAGTATATGGAGAATGGGAGTGTTTGGGATTGGCTACATGGGGAACCCCTCAAATTAAAGAGGAGACTTGATTGGGACACAAGGTTCAGAATTGCTGTGACATTAGCTCAGGGAGTGGAGTACCTCCATCATGATTGTGTGCCAAAGATCCTTCACAGGGACATCAAATCTAGCAACATATTGCTAGATTCCAACATGGAGTCACACTTGGGAGACTTTGGTCTAGCAAAAACACTCTTTGAGAATCATGAATCTATCACTGAGTCCAATTCTTGTTTTGCTGGGTCTTATGGCTACATTGCCCCAGAGTATGCATATTCAATGAAGGCAACAGAGAAAAGTGATATGTACAGCATGGGAATTGTGCTCATGGAACTTGTTAGTGGTAAGACACCGACAGACGCAGCTTTCAGAGCAGAGATGAACATGGTGAGATGGGTGGAGATGCACCTTGACATGCAAAGCACTGCAGGAGAGGAAGTGATAGATCCTAAAATGAAACCCCTTTTGCCTGGTGAAGAGTTTGCTGCATTCCAGGTTCTTGAGATAGCAATACAGTGCACAAAAACTGCACCACAGGAGAGGCCAACGGCACGGCAAGTGTGTGATCTTCTTCTGCATGTGTCCAACAACAAGAAGGTGGAGTTTGAGAAGACGAATCCGGATCATTACTAG 3774 0.4399 MKEETMRISTLAIVILLFFSFALLLCHGNESTMRVLLEVKTSFTEDPENVLSDWSVNNTDYCSWRGVSCGSKSKPLDHDDSVVGLNLSELSLSGSISPSLGRLKNLIHLDLSSNRLSGPIPPTLSNLTSLESLLLHSNQLTGHIPTEFDSLMSLRVLRIGNNKLTGPIPASFGFMVNLEYIGLASCRLAGPIPSELGRLSLLQYLILQENELTGRIPPELGYCWSLQVFSAAGNRLNDSIPSTLSRLDKLQTLNLANNSLTGSIPSQLGELSQLRYMNVMGNKLEGRIPPSLAQLGNLQNLDLSRNLLSGEIPEELGNMGELQYLVLSENKLSGTIPRTICSNATSLENLMMSGSGIHGEIPAELGRCHSLKQLDLSNNFLNGSIPIEVYGLLGLTDLLLQTNTLVGSISPFIGNLTNMQTLALFHNNLQGDLPREVGRLGKLEIMFLYDNMLSGKIPLEIGNCSSLQMVDLFGNHFSGRIPLTIGRLKELNFFHLRQNGLVGEIPATLGNCHKLSVLDLADNKLSGSIPSTFGFLRELKQFMLYNNSLEGSLPHQLVNVANMTRVNLSNNTLNGSLAALCSSRSFLSFDVTDNEFDGEIPFLLGNSPSLERLRLGNNKFSGEIPRTLGKITMLSLLDLSRNSLTGPIPDELSLCNNLTHIDLNNNLLSGHIPSWLGSLPQLGEVKLSFNQFSGSVPLGLFKQPQLLVLSLNNNSLNGSLPGDIGDLASLGILRLDHNNFSGPIPRSIGKLSNLYEMQLSRNGFSGEIPFEIGSLQNLQISLDLSYNNLSGHIPSTLGMLSKLEVLDLSHNQLTGEVPSIVGEMRSLGKLDISYNNLQGALDKQFSRWPHEAFEGNLLCGASLVSCNSGGDKRAVLSNTSVVIVSALSTLAAIALLILVVIIFLKNKQEFFRRGSELSFVFSSSSRAQKRTLIPLTVPGKRDFRWEDIMDATNNLSEEFIIGCGGSGTVYRVEFPTGETVAVKKISWKNDYLLHKSFIRELKTLGRIKHRHLVKLLGCCSNRFNGGGWNLLIYEYMENGSVWDWLHGEPLKLKRRLDWDTRFRIAVTLAQGVEYLHHDCVPKILHRDIKSSNILLDSNMESHLGDFGLAKTLFENHESITESNSCFAGSYGYIAPEYAYSMKATEKSDMYSMGIVLMELVSGKTPTDAAFRAEMNMVRWVEMHLDMQSTAGEEVIDPKMKPLLPGEEFAAFQVLEIAIQCTKTAPQERPTARQVCDLLLHVSNNKKVEFEKTNPDHY* 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1281 1257 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 8 1255 - -
Gso15g1281 1257 Pfam Leucine rich repeat N-terminal domain 35 69 IPR013210 -
Gso15g1281 1257 SUPERFAMILY Protein kinase-like (PK-like) 932 1239 IPR011009 -
Gso15g1281 1257 Gene3D Transferase(Phosphotransferase) domain 1 1036 1256 - -
Gso15g1281 1257 ProSitePatterns Protein kinases ATP-binding region signature. 961 984 IPR017441 GO:0005524
Gso15g1281 1257 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 8 1255 - -
Gso15g1281 1257 Gene3D Ribonuclease Inhibitor 390 534 IPR032675 -
Gso15g1281 1257 Gene3D Ribonuclease Inhibitor 535 869 IPR032675 -
Gso15g1281 1257 ProSiteProfiles Leucine-rich repeat profile. 802 824 IPR001611 GO:0005515
Gso15g1281 1257 Gene3D Phosphorylase Kinase; domain 1 916 1035 - -
Gso15g1281 1257 SMART serkin_6 955 1238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1281 1257 Pfam Leucine rich repeat 129 188 IPR001611 GO:0005515
Gso15g1281 1257 Pfam Leucine rich repeat 232 284 IPR001611 GO:0005515
Gso15g1281 1257 ProSiteProfiles Protein kinase domain profile. 955 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1281 1257 SUPERFAMILY RNI-like 400 835 - -
Gso15g1281 1257 SMART LRR_typ_2 416 440 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 247 271 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 727 751 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 631 655 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 824 855 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 295 318 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 679 703 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 103 126 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 800 823 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 127 150 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 199 223 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 319 343 IPR003591 -
Gso15g1281 1257 SMART LRR_typ_2 536 560 IPR003591 -
Gso15g1281 1257 Pfam Protein kinase domain 960 1235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1281 1257 Gene3D Ribonuclease Inhibitor 283 389 IPR032675 -
Gso15g1281 1257 Pfam Leucine Rich Repeat 802 819 IPR001611 GO:0005515
Gso15g1281 1257 Pfam Leucine Rich Repeat 105 127 IPR001611 GO:0005515
Gso15g1281 1257 SUPERFAMILY L domain-like 40 386 - -
Gso15g1281 1257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1083 1095 IPR008271 GO:0004672|GO:0006468
Gso15g1281 1257 Gene3D Ribonuclease Inhibitor 186 282 IPR032675 -
Gso15g1281 1257 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Gso15g1281 1257 PRINTS Leucine-rich repeat signature 634 647 - -
Gso15g1281 1257 PRINTS Leucine-rich repeat signature 800 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1281 Gso-Chr15 13089828 13094483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1281 655 847 Receptor kinase-like Gene Family AT5G56040 31.674 6.77e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso15g1281 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1281 - - gmx:100797153 2399.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1281 15 13089828 13094483 Gso9g0415 9 4108017 4112665 GST