Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1264 ATGTTTCGTTCCCAACGCTTCAAACCCCTTCTCTATCTGAAGGGACTCACAACACCACCATCACTTCAAACCCCGAAACCCAATTCTCCTTTTCCCTCAACACTCTTTCCGAAACACATCTCACTCACTTCACAGCAACACTCATTTGCGGCTTCCTACCTCGTAAACACCTTCGGCCTCTCCCCGGAAACCGCTCTCAAGGTCTCCGAGCGCGTTCGCTTCGACACCCCTCAGAAGCCTGACTCAGTGATCGCGTTCTTCACAAGCAATGGATTCACCGTTCCCCAGATAAAAAGCATCGTCAAAAGGGTACCCGACGTGCTCAATTGCAACCCCCACAAGAGGCTCTGGCCAAAGTTCCAATTTTTACTCTCAAAAGGTGCTTCTTATCCCTCTGACATCGTTCACCTCGTGAATAGGTGCCCCAGAATCATCAATTCCAGCCTCGAGAAAAACGTGATCCCCACCTTCGAATTGGACTCCAGCATCACCTATTTGTTCCGTAGGAGGGCTTCTATACTCTTGTCTAAGGACTTGAGGAAGAACATTGATGAAGTTAAGGAATTGGGGTTTGATCCTTCCAAGATGAGTTTTGTGATGGCCTTGCACGCCAAAATGAGTGTCCCGAAATCGAGGTGGGATGCCAAAGTTGATGCCTGCAAGAGCTGGGGATGGTCTGAGGAAATGGTTCTTGATGCCTTCAGGAAGCATCCCATCTTTATGTTAGGGTCCAAAGATAAGATTAATGAGGTGATGAGATTTTGGGTTGATCAGTTAGGTTGGGACCCTTTGGCCCTCGCCAAAATGCCGAAGATTTTTGGATATAGTTTGAAGGGAAGGATCATTCCGAGGGGTTTGGTTGTCCGATATTTGATCGGGAAAGGTTTGAGAAAGAAGAGTGCCAGCTTGTTAACCCCATTTTCTGCTTCTGAAAGGTTGTTTCTTGAAAATTATGTGATGCGTTTTAAGGAGGAAACACATCAACTATCAAAGGTTTATGTGGAAAAATGA 1011 0.4649 MFRSQRFKPLLYLKGLTTPPSLQTPKPNSPFPSTLFPKHISLTSQQHSFAASYLVNTFGLSPETALKVSERVRFDTPQKPDSVIAFFTSNGFTVPQIKSIVKRVPDVLNCNPHKRLWPKFQFLLSKGASYPSDIVHLVNRCPRIINSSLEKNVIPTFELDSSITYLFRRRASILLSKDLRKNIDEVKELGFDPSKMSFVMALHAKMSVPKSRWDAKVDACKSWGWSEEMVLDAFRKHPIFMLGSKDKINEVMRFWVDQLGWDPLALAKMPKIFGYSLKGRIIPRGLVVRYLIGKGLRKKSASLLTPFSASERLFLENYVMRFKEETHQLSKVYVEK* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1264 336 SMART mt_12 263 297 IPR003690 GO:0003690|GO:0006355
Gso15g1264 336 SMART mt_12 135 192 IPR003690 GO:0003690|GO:0006355
Gso15g1264 336 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Gso15g1264 336 SMART mt_12 231 262 IPR003690 GO:0003690|GO:0006355
Gso15g1264 336 Gene3D Transcription termination factor 3, mitochondrial 61 331 IPR038538 -
Gso15g1264 336 Pfam mTERF 85 249 IPR003690 GO:0003690|GO:0006355
Gso15g1264 336 Pfam mTERF 177 314 IPR003690 GO:0003690|GO:0006355
Gso15g1264 336 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 17 159 - -
Gso15g1264 336 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 160 336 - -
Gso15g1264 336 PANTHER CGI-12 PROTEIN-RELATED 17 159 IPR003690 GO:0003690|GO:0006355
Gso15g1264 336 PANTHER CGI-12 PROTEIN-RELATED 160 336 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1264 Gso-Chr15 12815975 12817556 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso15g1264 mTERF 1.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1264 K15032 - gmx:100792944 678.322