Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1263 ATGTTGAATACCCTTCTCTGCAAATGCATCACTTTCGCAGCAACATCACGTTACCCTCTTTTCCACCACTACCCATTACCATTTTCTCTGCGTTTCTACACCACAACCACTTCAAATTCACGCTCCTTTGCGGTATCCTACCTCATCCACAATTTTGGGTTCTCCCCTGAATCTGCTTCCAAAGTTTCTGAAAACCACAAAATTTATTTCCGTACCCCGGAAAAGCCTGAGTCAGTAATCAGGTTCTTCAGAGACCACGGTTTTTCTGACTCCCAAATAAACAATATGGTTAGAAGGGTACCTAGGCTGATTTCCTGCAACCCTTGCAAAAGGGTATTGCCCAAGTTTGAATTTTTACTCTCGAAAGGTGTTTCTAGCTCTGAAATTGTTGACCTAATTAGTAAGTACCCTTTAATGTTGACTCGAAGCCTGAAGAATTTTATAGTGCCAACCTACGAATTGGTATATAGATTCTTGCAATCTGATAAGAACACTGTTGCTTGTATGTTTGCTAATTCATCTGTCTTTGGTAGCGGCTATCTTGTGGCACACAACGTCAGTGTGATGCTTAAGAATGGATTGAGTGAATCAAACATTGCAAGATTGCTTCGGTACCGTAGTAAGGCGGTGTTCCGTGCAACGGATATTCTTAAAGTGGTGAGGGAAGTAAAGGATTTGGGATTTGATCCTTCAAAAGTTGCTTTTGTTATGGCATTGCTAGCCATAAAACGTTACGATCAAAACTTGTGGAAGGAGAAAGTTGACGTCTTCAAGAAATGGGGTTGGTCTGATGAAACCTTTCTTGAAGCATTTAGGAGGCACCCTCACTGTATGTTGACATCCACTGACAAAATAAATATAGTGATGAATTTTTGGGTCAATCAGATGGGGTGGGATGCTTTAGCCCTTGTCAAAGGTCCAAAGATTTTCGGGTTGAGTATGGAGAAAACAATCATTCCAAGAGCCTCAATAGTGCAGTTGCTTCTTGAGAAAGGTTTGCGAAAAAGGAGTGCAAGCATAACTTGCCCCATTATGATACCTGAAAAGAGGTTCCTGAACAGGTTTATAAAATGTTTTAAGGAGGAGTCTTCTGATCTGTTAAAGTTGTATGCGGAAAAGCTGAATCTTGCGTATTCCAGGGAGAAGTCTGGAATGTTGTGCACCAAATAA 1170 0.4103 MLNTLLCKCITFAATSRYPLFHHYPLPFSLRFYTTTTSNSRSFAVSYLIHNFGFSPESASKVSENHKIYFRTPEKPESVIRFFRDHGFSDSQINNMVRRVPRLISCNPCKRVLPKFEFLLSKGVSSSEIVDLISKYPLMLTRSLKNFIVPTYELVYRFLQSDKNTVACMFANSSVFGSGYLVAHNVSVMLKNGLSESNIARLLRYRSKAVFRATDILKVVREVKDLGFDPSKVAFVMALLAIKRYDQNLWKEKVDVFKKWGWSDETFLEAFRRHPHCMLTSTDKINIVMNFWVNQMGWDALALVKGPKIFGLSMEKTIIPRASIVQLLLEKGLRKRSASITCPIMIPEKRFLNRFIKCFKEESSDLLKLYAEKLNLAYSREKSGMLCTK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1263 389 Pfam mTERF 81 234 IPR003690 GO:0003690|GO:0006355
Gso15g1263 389 Pfam mTERF 244 351 IPR003690 GO:0003690|GO:0006355
Gso15g1263 389 SMART mt_12 59 89 IPR003690 GO:0003690|GO:0006355
Gso15g1263 389 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Gso15g1263 389 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Gso15g1263 389 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Gso15g1263 389 SMART mt_12 233 263 IPR003690 GO:0003690|GO:0006355
Gso15g1263 389 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Gso15g1263 389 Gene3D Transcription termination factor 3, mitochondrial 178 369 IPR038538 -
Gso15g1263 389 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 379 - -
Gso15g1263 389 PANTHER CGI-12 PROTEIN-RELATED 15 379 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1263 Gso-Chr15 12802923 12806318 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso15g1263 mTERF 9.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1263 K15032 - gmx:102663414 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1263 15 12802923 12806318 Gso9g0399 9 3876386 3877264 GST