Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1262 ATGTTGAATACCCTTCTCTACAAATGCGTCACTTTCACTGCAGCATCACATTACTCTCTTTTCCCCCACTACCCATTACTATTTTCTCTGCGTCTCTGCACAACAACCACTTCAAATTCACGCTCCTTTTCGGTATCCTACCTCATCCACAATTTTGGGTTCTCCTCTGAATCTGCTTCCAAAGCTTCTGACTCTCACAAAATTTCTTTCCAGACCCCGGAAAAGACTGAGTCAGTTATCAGGTTCTTCAGAGACCACGGTTTCTCTAACTCCCAAATAATCAATATGGTTAGAAAGGTACCATGGTTGCTTTCCTGCGACCCTTGCAAAAGGGTATTGCCCAAGTTTGAATTTTTACTCTCAAAAGGTGTTTCTAGCTCTGAAATTATTGACCTAGTGAGTAAGCACCCTGGATTACTGAGTCCAAGCCTGGAGAATAATATAGTCCCAACCTATGAATTGGTACATGGATTCTTGAAATCTGATGAGCACACTATTAATTGTTTGTTTGGTAATTCCATTTTCTCTGGCGGCCATTATGTCGCGCGCAACATCAGAGTGTTGCTTCAGAATGGAGTGGGAGAAACAAACATTGCACGATTATTGCGGAACCGTTGTAAAGGGGTTTTCTCCTCAACTGATATTCTTAAGGTGGTGAAGGAAGTAAATGATTTGGGGTTTGATCCTTCAAAATCGACTTTTGCTTTAGCATTGGTTGTTAAAAGTAGGAGCCAAACCTCATGGAAGGAGAAAGTTGACGTCTATAAGAAATGGGGTTGGTCCGATGAAGCCTGTCATGAAGCTTTTAGAAGGTGCCCTCACTGTATGTTGACATCGATTGACAAAATAAATACTGTGATGAAATTTTGCGTCAATCAGTTGGGCTAG 888 0.4155 MLNTLLYKCVTFTAASHYSLFPHYPLLFSLRLCTTTTSNSRSFSVSYLIHNFGFSSESASKASDSHKISFQTPEKTESVIRFFRDHGFSNSQIINMVRKVPWLLSCDPCKRVLPKFEFLLSKGVSSSEIIDLVSKHPGLLSPSLENNIVPTYELVHGFLKSDEHTINCLFGNSIFSGGHYVARNIRVLLQNGVGETNIARLLRNRCKGVFSSTDILKVVKEVNDLGFDPSKSTFALALVVKSRSQTSWKEKVDVYKKWGWSDEACHEAFRRCPHCMLTSIDKINTVMKFCVNQLG* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1262 295 PANTHER CGI-12 PROTEIN-RELATED 16 295 IPR003690 GO:0003690|GO:0006355
Gso15g1262 295 Pfam mTERF 81 289 IPR003690 GO:0003690|GO:0006355
Gso15g1262 295 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 295 - -
Gso15g1262 295 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Gso15g1262 295 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Gso15g1262 295 SMART mt_12 266 295 IPR003690 GO:0003690|GO:0006355
Gso15g1262 295 Gene3D Transcription termination factor 3, mitochondrial 40 171 IPR038538 -
Gso15g1262 295 Gene3D Transcription termination factor 3, mitochondrial 172 295 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1262 Gso-Chr15 12797207 12798866 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso15g1262 mTERF 5.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1262 K15032 - gmx:102666855 548.51