Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1261 ATGATGTTTCCTTCCCCACGCTTCAAACCCTTTCTCTATCTGAACTCACTCACAAGAACACCACTGCTTCAACTTCAAACCCCGAAATCGAATCAAACTTTCCCACCATCACTCACTCCGAAACACACCTCAACCACTTCACAGCACCACCCATTCAAGGTTTCCTACCTCGTAAGCACTTGTGGCTTCTCCGTAGAAACCGCTCTCAAGATCTCCAAGTTCACCCAATTCAAAACCCCCGAAAAACCCGATTCAATCATCGCCTTATTCAGAAGCCACGGTTTCTCCAACACCCAGATAATCAGCATTATTAGAAGAGCACCCAATGTTCTCTCAGGCGACCCCCACAAAAGGATTTTCCCAAAGTTTGAATTTTTACGCTCCAAAGGGGCCTCAGGCTCCGACATTGTGGAACTGGTGACTAAGAACCCCAGAATCCTGTATGCGAACCTCGAGAATAATATTGTTCCTTCCTATGAGTTGGTGCGGAGGTTCCTTGAATCCGATAAGAAAACGATGGATTGCATTCGTGGTTGCGGACATTTCTTTGGTTCCGATCGTGCGTCGCAGAATGTGAAGTTGTTGATTGATGAGGGAGCCACGGACTCCGTCATCGCCTTTTTGTTACAGAGAAGGTTTTCTGTGATCTTGTGTTCTGGTTTTAAGGAGACCTTGGATGAAATTAAGGAAATGGGGTTTGAGCCTTTCAAGAAGAAGTTTGGGGTGGCGCTGATTGCAAAAAAGATCGTTCCGAAATCGCACTGGGAGGCTAAAGTTGATGTCTTTAAGAGATGGGGTTGGTCTGAAGAATTGGTTATTGGTATGTTCAAGAGGCAGCCCCTCTTTATGTTAGTGTCCCAAGATAAGATTGATCGGGTAATGAGATTTTGGGTTAAGCAGTTAGGTTGGGATTCTTTGGCCCTTGCCAAAAAGCCAGAGATTTTTGGATTTAGTTTGGAGAGAAGGATCATTCCAAGGGCTCTTGTTGTCCAGTATTTAGTCGCTAAAGGCTTGAGGAAAAAGAGTGCCAGCATGATTGTCCCATTTGCTGTTTCTGATAAGGAGTTTCTTGAAAAGTATGTGATGCGATTTAAGGAGGAAGAAGCGGAACTATTAAAGCTGTACCAGGGAAAAATGAGTGGTCATGGAAATAAGGAGGATGGTGCAGCTCCTTTAACCGTAGTGTAA 1188 0.447 MMFPSPRFKPFLYLNSLTRTPLLQLQTPKSNQTFPPSLTPKHTSTTSQHHPFKVSYLVSTCGFSVETALKISKFTQFKTPEKPDSIIALFRSHGFSNTQIISIIRRAPNVLSGDPHKRIFPKFEFLRSKGASGSDIVELVTKNPRILYANLENNIVPSYELVRRFLESDKKTMDCIRGCGHFFGSDRASQNVKLLIDEGATDSVIAFLLQRRFSVILCSGFKETLDEIKEMGFEPFKKKFGVALIAKKIVPKSHWEAKVDVFKRWGWSEELVIGMFKRQPLFMLVSQDKIDRVMRFWVKQLGWDSLALAKKPEIFGFSLERRIIPRALVVQYLVAKGLRKKSASMIVPFAVSDKEFLEKYVMRFKEEEAELLKLYQGKMSGHGNKEDGAAPLTVV* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1261 395 PANTHER CGI-12 PROTEIN-RELATED 19 381 IPR003690 GO:0003690|GO:0006355
Gso15g1261 395 MobiDBLite consensus disorder prediction 26 47 - -
Gso15g1261 395 Pfam mTERF 254 357 IPR003690 GO:0003690|GO:0006355
Gso15g1261 395 Pfam mTERF 88 291 IPR003690 GO:0003690|GO:0006355
Gso15g1261 395 Gene3D Transcription termination factor 3, mitochondrial 187 373 IPR038538 -
Gso15g1261 395 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 381 - -
Gso15g1261 395 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Gso15g1261 395 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Gso15g1261 395 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Gso15g1261 395 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Gso15g1261 395 SMART mt_12 207 234 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1261 Gso-Chr15 12790444 12792498 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso15g1261 mTERF 3.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1261 K15032 - gmx:102666739 778.474