Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1251 ATGGCGACGGAGCAGTTAATGTCCGGCGGCGGCTCCCGCTACGTCCAAATGAAATCGTCTCCGCCGTCGTCTCCGCCAGCCGCGGCGGCCGAGGAGATGTCCTCGGTCCCGTCGTTCCGGCACAGCGGCGCCGAGGCCAATCGGATTTTCGAGGAATTGCCGAAAGCCTCCATAGTCTCCGTCTCCCGCCCCGACGCCAGCGACATCAGCCCCATGCAACTCTCTTACACAATTCAGGTTCAGTACAAACAGTTCAAGTGGGAGCTAACAAAGAAAGCCCATCAAGTATTTATTTTGCATTTCTCGCTAAAGAAACGTGCCTTTATTGAGGAAATCCACGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACACTGCTATGGTGCAAGATGACGATGAAGGTGATGATGAAACTGTCCCGTTGCATACTGAAGAAACTCATGAAAGTGCCAAGGACAGAGATGTTCCATCTAGTGCTGCTCTGCCAATTATACGGCCAGCCTTGGGAAGACAGCATTCTATTGCAGACAGGGCAAAGAGAGCAATGCAAGGATATCTGAATCACTTTCTGGGAAATATCAGTATTGTGAACTCTCATGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTTTCACCTGAATATGGTCCTAAGCTGAAGGAAGAATATGTGATGGTGAAGCATCTACCCAAAATCCAGAAGGATGATGATTCCAGAAAGTGTTGTTTGTCTGACTGTTTTAGTTGCTGTAATGACAATTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTCGATACACAGCCTCTGGATATCATTGTTTTTGATGTACTGCCTGCCTCAGATGGGAATGGGGATGGTCGATTATCACTGGCGAGTGAGATGAAGGAACGAAATCCTTTACGCCATTCATTCAAGGTGACTTGTGGAATCCGGAGCATCAGAATTAGAGTGAAAAGTAGTAGTAAAGTTAAAGATTGGGTTGCTGCAATCAATGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATTTGCTCCTCCAAGAGGCCTAGTCGAAGATGGAAGTCAAGCCCAGTGGTTCATTGATGGACGAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTACCTACGGCGACCTTTCCACACTCATGCTTCGTCAAGGCTTGATAATTTGTTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATAAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCGCATCATGAAAAACTAGTCATTATTGATAATCATATTTGCTTTATTGGTGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCTAATCTGGCCTGGAAAAGACTATTATAACCCAAGAGAATCTGAACCTAATTCATGGGAAGATACAATGAAAGATGAATTAGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGCCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCCAAGAGGAACAAAGCTCCATATGAGCAAGCAATTCCATTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCAGAGAGATACAGATTGCAAGTAGGAACATTGACAATCATAGAGTTCTCAAGAGAGAAGATTCATTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCTCAGGAGTCTGATGGGTTGGATACTCATGAAGGAGACCAAAAATTGAATGGGGTAATCTCCTTTTCACATCAGCTTGACAAGCCAAGAAGGATCAGCAGTGGTCTTCCATTCTCGTTCCGGAAGGCCAAAATTGTAGCAGTTGGCCCAGATACACCAATGAAGGGCTTTGTAGATGATCTAGATTCTGAGCATGATCGTGAGAAAATGTCTCTTGATAGAGTGGCTCATATTGATTTACAAAGTACAAATCCAGAATGGTGGGAAACACAAGAACGGGGTGACCAAGGAGGTTTTGCTGAAGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGTCGTTGCCAAGTTATTAGGAGCGTAAGTCAATGGTCTGCTGGAACAAGTCAAACTGAAGAGAGCATCCACAATGCCTATTGCTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAATTTTTTATCTCGGGTCTTTCTGGAGATGAGATGATACGGAATCGTGTGTTAGAAGCTTTATATCGACGGATTATGCGAGCTTACAATGACAAAAAATCTTTCAGGGTTATAGTTGTCATACCTCTCCTGCCTGGCTTCCAGGGTGGTCTTGATGATAGCGGTGCAGCATCCGTGAGGGCCATAATGCATTGGCAGTATCGAACCATTTGCCGGGGGCAGAATTCTATCTTGCATAATCTTTATGAACTTCTTGGTTCTAAAATACATGACTACATCTCTTTTTATGGCCTAAGGTCTTACGGTAGACTCTCTAATGGTGGCCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATTACTTTGATTGGATCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGGTATAGTTTTAGAAGACAGAGAGTTTATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTTTCCTTGACCCTCCGATTGTCATTATGGTCTGAACACTTGGGTCTCCCTATAGGAGAGGTCAATCAAATAATGGACCCAGTTGTTGAATCTACTTACAGGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACATACCAGATTTTCTTTCAGACAAAGTGTGGCGTTTTGGAAAGAAAGAATTGGTCACACAACCATTGATTTAGGAATAGCCCCAGAAAAATTAGAGTCCTATCATGATGGAGGCATTAAGAACACCGATCCCTTGGAGAGATTAGCATCATTGAAGGGTCATCTCGTCTCCTTTCCCTTGGAGTTCATGTGTCAGGAAAGTCTAAGACCCGCTTTTAATGAAAGCGAATACTACGCCACTCAAGTTTTCCATTGA 3372 0.4351 MATEQLMSGGGSRYVQMKSSPPSSPPAAAAEEMSSVPSFRHSGAEANRIFEELPKASIVSVSRPDASDISPMQLSYTIQVQYKQFKWELTKKAHQVFILHFSLKKRAFIEEIHEKQEQVKEWLQNLGIGEHTAMVQDDDEGDDETVPLHTEETHESAKDRDVPSSAALPIIRPALGRQHSIADRAKRAMQGYLNHFLGNISIVNSHEVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDDDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLVEDGSQAQWFIDGRAAFEAIASSIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGRSREIQIASRNIDNHRVLKREDSFSSSSQDQDIPLLLPQESDGLDTHEGDQKLNGVISFSHQLDKPRRISSGLPFSFRKAKIVAVGPDTPMKGFVDDLDSEHDREKMSLDRVAHIDLQSTNPEWWETQERGDQGGFAEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKSFRVIVVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKIHDYISFYGLRSYGRLSNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIGIVLEDREFIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPIGEVNQIMDPVVESTYRDIWMATAKTNTTIYQDVFSCVPNDLIHTRFSFRQSVAFWKERIGHTTIDLGIAPEKLESYHDGGIKNTDPLERLASLKGHLVSFPLEFMCQESLRPAFNESEYYATQVFH* 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1251 1123 CDD PH_PLD 203 350 - -
Gso15g1251 1123 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 920 947 IPR001736 GO:0003824
Gso15g1251 1123 SMART pld_4 487 514 IPR001736 GO:0003824
Gso15g1251 1123 SMART pld_4 920 947 IPR001736 GO:0003824
Gso15g1251 1123 SMART PH_update 226 354 IPR001849 -
Gso15g1251 1123 Pfam Phospholipase D Active site motif 487 514 IPR001736 GO:0003824
Gso15g1251 1123 SUPERFAMILY Phospholipase D/nuclease 760 971 - -
Gso15g1251 1123 MobiDBLite consensus disorder prediction 1 37 - -
Gso15g1251 1123 SUPERFAMILY PH domain-like 258 350 - -
Gso15g1251 1123 MobiDBLite consensus disorder prediction 1 23 - -
Gso15g1251 1123 MobiDBLite consensus disorder prediction 137 162 - -
Gso15g1251 1123 MobiDBLite consensus disorder prediction 147 161 - -
Gso15g1251 1123 PIRSF PLD_euk 18 623 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gso15g1251 1123 PIRSF PLD_euk 623 1123 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gso15g1251 1123 CDD PLDc_vPLD1_2_yPLD_like_2 780 964 - -
Gso15g1251 1123 Pfam PLD-like domain 793 967 IPR025202 -
Gso15g1251 1123 Gene3D Endonuclease Chain A 743 980 - -
Gso15g1251 1123 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 487 514 IPR001736 GO:0003824
Gso15g1251 1123 MobiDBLite consensus disorder prediction 638 664 - -
Gso15g1251 1123 CDD PLDc_vPLD1_2_yPLD_like_1 380 524 - -
Gso15g1251 1123 Gene3D - 255 352 IPR011993 -
Gso15g1251 1123 Gene3D Endonuclease Chain A 374 610 - -
Gso15g1251 1123 SUPERFAMILY Phospholipase D/nuclease 338 607 - -
Gso15g1251 1123 PANTHER PHOSPHOLIPASE 39 1120 - -
Gso15g1251 1123 Coils Coil 105 125 - -
Gso15g1251 1123 PANTHER PHOSPHOLIPASE D 39 1120 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1251 Gso-Chr15 12677700 12690690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1251 1 1004 Phospholipase D Gene Family (Wang group) AT3G16785 72.520 0.0 1404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1251 K01115 - gmx:100780514 2251.86