Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1248 ATGACGCTATCACTGTGGGAAGACACGTGTGTCCGCTTAGAGGCTTCAGAGAAGAAACTTTCAAACCCAATGAGGGAGATAAAGGTGCAGAAGCTCGTCCTCAATATCTCCGTTAGTGAGAGTGGAGATCATCTCACCAGAGCCACTAAGCAAGGTACACTTATTCGTTCCTTTGGGATTAGAAGAAATGAGAAGATTGCATGCTATGTCATTGTCAAAGGTGACAAGGCGATGCAACTTTTGGAGAGTGGTTTGAAGGTGAAGGAATATATGAACTTCTCAGAAGGAACATCAGTGATACTGGTTGCTTTGGCCTTGGCATTCAGGAGCATATTGATTTGA 342 0.4386 MTLSLWEDTCVRLEASEKKLSNPMREIKVQKLVLNISVSESGDHLTRATKQGTLIRSFGIRRNEKIACYVIVKGDKAMQLLESGLKVKEYMNFSEGTSVILVALALAFRSILI* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1248 113 Gene3D - 16 99 IPR022803 -
Gso15g1248 113 SUPERFAMILY RL5-like 7 94 IPR022803 -
Gso15g1248 113 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 15 96 IPR002132 GO:0003735|GO:0005840|GO:0006412
Gso15g1248 113 PANTHER 60S RIBOSOMAL PROTEIN L11 15 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1248 Gso-Chr15 12622104 12624916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1248 15 95 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 67.677 5.65e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1248 K02868 - sspl:121753218 123.25