Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1240 ATGAGTTGTTTAATCAAAAACAAAATGGTGTTTGTGGAAAAGATACAACAGCTCACAAATATTCCATCTGAACCAACATGGAATATCAGGCATCATCTTCCTCCTTCAAATTGGCCAGTTGAAGGCAATGTAGATATCAAAGACTTGCAGGTTAGATATCATCTAAACACTCCTCTGGTTCTTAAAGGCATTAGCATTAGTGGAGGTGAAAAGGTTGGTGTTGTTGGTCGAACTGGGAGCGAAAAGTCAACTTTAATTCAAGTATTCTTTAGGCTGGTGGAACCTTCAAGAGGGAAAATAACAATTGATGATATTGAAATATTCGCTTTGGGGCTTCGTGATCTTAGATCACGGTTTGGTATCATTCCTCAGGAGCTGATCCTTTTTGTGTATGGATGA 399 0.386 MSCLIKNKMVFVEKIQQLTNIPSEPTWNIRHHLPPSNWPVEGNVDIKDLQVRYHLNTPLVLKGISISGGEKVGVVGRTGSEKSTLIQVFFRLVEPSRGKITIDDIEIFALGLRDLRSRFGIIPQELILFVYG* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1240 132 Pfam ABC transporter 65 128 IPR003439 GO:0005524
Gso15g1240 132 Gene3D - 27 131 IPR027417 -
Gso15g1240 132 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 129 - -
Gso15g1240 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 129 IPR027417 -
Gso15g1240 132 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1240 Gso-Chr15 12446180 12447676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1240 64 129 Calmodulin-binding Proteins AT2G36910 34.848 1.97e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1240 - K05666 gsj:114387761 267.314