Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1233 ATGGAAGGTAACAAGGACGAAGCATTACGCTGCGTTCGCATCGCCGAAGAAGCAATCGCGTCGGGAAACAAAGACCGCGCCCTCAAATTCCTCAGAATCGCGCAACGCCTCAACCGCGATTTGCCCCTCCAGTCCCTGCTCGAAAAGTGCGACCGCTTCGATTCGCACTCCGCCGCCGCTGCCGCCTGCGGCGGCAGCGGCGCCTCTCCGGCGAACGGTCACTCTCCGCGTCGCGAGGGTTTGAACGGGGAGAGGAATTACACGGAGGAAAACGTGCAGCTAATTAGAGAAATCAAGGGAAAGAGCGATTACTATGCGATTCTGGGATTGGAAAAGAGTTGCTCCGTGGAAGAGATTCGAAGAGCGTATCGGAAGCTCTCTCTGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCTCCGAAGATGCGTTCAAGAAGGTTTCGAAGGCGTTCAAGTGTTTGAGCGACGACGGCTCAAGAAGGATGTACGACCAAACCGGAACCGGCACCGACGATTATGAGAGCACCGAGGTAAACACCTTCTGGCGAAGAAGAAGAAGAAGGACGACGACAACGCGCGATTTCTTCGGAGACGAGTTCGATCCGGACGAGATATTCAGGGCGTTCTTCGGACACTCCGACGTGTTCGGGAGAAACAACAATGTTTACCGGACACGCGGGATGGGGAATCCGAATCATCAGCATAGGCACGAATTCAATGCTGGATCGGGAGGGAGGCATCACAATGTGATGCTTCTGATTCAGCTCTTGCCGTTTTTGATTATTGTGCTGCTCGCGTACTTGCCGTTTTCGGAGCCTGAGTATTCGTTACACAAGCACTACAACTACCAGATTCCCAAGACCACGGAGCGGCTCGAGGTTCAGTTCTTTGTGAAGTCGACCGCGTTTGATGCGAATTATCCACTAGGGAGTGATGCCCGTGAGGCGATTGAGGAGAGTGTTATAAAGGATTATAGGAGTATGCTGAGGAGATACTGTCAGGTGGAGATGCAGAGACGGAGCTGGAATAGGAATCTGCCTGCTCCTCACTGTGATAAGCTGCATAACTTTGCAGTCGTGGCATGA 1086 0.5295 MEGNKDEALRCVRIAEEAIASGNKDRALKFLRIAQRLNRDLPLQSLLEKCDRFDSHSAAAAACGGSGASPANGHSPRREGLNGERNYTEENVQLIREIKGKSDYYAILGLEKSCSVEEIRRAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTGTDDYESTEVNTFWRRRRRRTTTTRDFFGDEFDPDEIFRAFFGHSDVFGRNNNVYRTRGMGNPNHQHRHEFNAGSGGRHHNVMLLIQLLPFLIIVLLAYLPFSEPEYSLHKHYNYQIPKTTERLEVQFFVKSTAFDANYPLGSDAREAIEESVIKDYRSMLRRYCQVEMQRRSWNRNLPAPHCDKLHNFAVVA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1233 361 Pfam Domain of unknown function (DUF1977) 271 341 IPR015399 -
Gso15g1233 361 PANTHER AT29763P-RELATED 1 359 - -
Gso15g1233 361 ProSiteProfiles dnaJ domain profile. 103 167 IPR001623 -
Gso15g1233 361 SUPERFAMILY Chaperone J-domain 99 213 IPR036869 -
Gso15g1233 361 MobiDBLite consensus disorder prediction 64 86 - -
Gso15g1233 361 PANTHER CHAPERONE PROTEIN DNAJ 49 1 359 - -
Gso15g1233 361 SMART dnaj_3 102 159 IPR001623 -
Gso15g1233 361 Gene3D DnaJ domain 100 222 IPR036869 -
Gso15g1233 361 CDD DnaJ 103 156 IPR001623 -
Gso15g1233 361 PRINTS DnaJ domain signature 105 123 IPR001623 -
Gso15g1233 361 PRINTS DnaJ domain signature 123 138 IPR001623 -
Gso15g1233 361 PRINTS DnaJ domain signature 139 159 IPR001623 -
Gso15g1233 361 PRINTS DnaJ domain signature 159 178 IPR001623 -
Gso15g1233 361 Pfam DnaJ domain 103 164 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1233 Gso-Chr15 12357353 12362643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1233 98 164 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.211 4.66e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1233 K09518 - gmx:100820432 719.924