Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1230 ATGCCGCAGGGCAATGCCGCCGCCGCAGCAGCGCTGCTGGACCACGGCGGCGATGCCGGCGACGCCGTAATGGCGCGGTGGTTGCAGTCCGCTGGCCTGCAGCATCTAGCCTCTCCCCTCGCTTCCACCGCCATCGATCATCGCCTCCTCCCTAACCTTCTCATGCAGGGTTATGGAGCACAGTCTACTGAGGAGAAGCAGAGGCTTTTAAAGTTAATGAGAAACCTCAATTTTAATGGGGAATCTGGTTCAGAGCCATATACACCCACCACTCAATCTTTAGGTGTGGCTGGGTCGGATGGGTTTTATTCTCCTGAGTTCAGGGGGGAGTTTGGAGCTGGGCTTTTGGATCTTCATGCTATGGATGATACAGAGCTTTTGTCTGAGCATGTAGTTTCAGAACCTTTTGAGCCATCACCCTTCATGCCTGGAGATACTAGAGTATTTGAAGACGATTTCGATCCAATTAACAGCAAGCTGGAAAGCGGGGAAGCAGATACTGATGCATCAATTTCCTTACCTATGAATAGCACAAGGGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGGCCTTTAAACAAGAAGGAGCTTGCTAAGAAGGAGGATGATGTTGTAACCGTAACTGGCAATGCATATTTGACAGTCCATGAACCGAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTGCTTGATGAGCATGTGACCAATGATGAAGTATACCGAAGCACAGTTGAACCAATTATTCCTACAATATTTGAGCGAACCAAAGCTACCTGTTTCGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCTTTACCACTCAGAGCTGCAGAAGACCTTGTTCGACAGTTGCATCAGCCAGTTTACCGGGATCAGAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTTTATGATCTTCTTAGTGACAGAAAGAAACTTTGCATGAGGGAAGATGGACGGCAGCAAGTTTGTATTGTAGGACTGCAAGAATTTGAAGTTTGTGATGTACTAATTGTCAAAGAATTCATTGAAAAGGGAAGTGCTGCAAGAAGTACAGGATCCACTGGTGCTAATGAGGAGTCCTCCAGGTCACATGCTATCTTGCAACTGGCTGTAAAGAAGCACAGTGAAGTTAAAGCGAGCAAGCGAAACAATGATGGGAATGAGGCAAGAAGTGGGAAGGTTGTGGGAAAAATTTCTTTTATTGATCTTGCTGGAAGTGAACGAGGTGCTGACACTACTGATAACGATCGTCAGACACGGATTGAAGGAGCAGAAATCAATAAGAGCCTTTTGGCTTTGAAGGAGTGTATTCGTGCTTTAGACAATGACCAGATCCATATTCCATTTCGAGGAAGCAAACTTACAGAAGTGCTTCGTGACTCCTTTGTGGGTAATTCAAAGACTGTTATGATCTCTTGTATATCTCCAGGTGCCGGGTCATGTGAACACACACTTAATACCTTGAGATATGCAGATCGGGTTAAAAGTCTATCCAAAAGTGGGAATCCTAGAAAAGACCAGGTCCCAAATGCTGTACCACAAACTAATAATAAGGAGGTTTCATCCACATCATCCTTTCCAGCCAGTGCTGGTGCAGAGGATTTTAATGATCAACGTCAAGAGAAAACAATGGATATGGGCAGGAAATTTGTTGAAAAGGAAAATTCTTTGCACAGCTCTGCAGCAGCTGCTGTTGACAAACAGCCATTAAGTTATTCTTCAAATTACCTATCAAATGGGGGAGAGGAAAAAGGCTTTCCTTCAGCTTCAGTGGACAGGGAGAGGTATGAAGTGAAGAACTCACATGGTGACTCTACCAGTCAAAAGATGAACTCTTATTCACAAAGTGATACGGATGAGAAAGTGCAAAAGGTGTCTCCCCCGCGCAGAAAAGGCTATAAGGATGAAAAATCCGAAAGGCCTGCTAACTGGATGAAAAAAGATGCCAACGGTTCTGATCTCTTCACTACAAGCTCAAAGCAGCAGAGCACAGGGAATTATGGGACTGTGTCTAAGGATGAAAAGTCTGAAAGGCCTGCAAACTGGATGAAAAGGGATGCCAATGGTTCTGATCTTGTCACTACAAGCTCCAAGCAGAGCACCGGGAGTTATAGCACTTTGTCTAAGGATGAAAAGTCTGAAAGGCCTGCAAACTGGATTAAAAGGGATGCCAACGGCTCTGATACCTTCACTACAAGCTCCAAGCAGCAGAGCACCGGGAATTATAACAATATCACCACTGGATCCAGGCTTAATGAAACAGAATCCTCTCCTGATGGGAATGTCAGTGCAGTACTTGAGGAGGAAGAAGCGCTAATTGCTGCTCATAGGAAAGAAATTGAAGATACAATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCAGAGGTGGACCAACCGGGAAGCCTTATTGACAACTATGTAACCAAATTGAGCTTTGTGCTTTCTCGCAAAGCAGCTAGTCTCGTGGGTCTTCAAGCTCGTCTTGCAAGATTCCAACATCGACTAAAAGAGCAAGAAATTCTAAGTAGAAAAAGAGTTCCCCGTCAATAA 2619 0.4437 MPQGNAAAAAALLDHGGDAGDAVMARWLQSAGLQHLASPLASTAIDHRLLPNLLMQGYGAQSTEEKQRLLKLMRNLNFNGESGSEPYTPTTQSLGVAGSDGFYSPEFRGEFGAGLLDLHAMDDTELLSEHVVSEPFEPSPFMPGDTRVFEDDFDPINSKLESGEADTDASISLPMNSTRENNVAKIKVVVRKRPLNKKELAKKEDDVVTVTGNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDEHVTNDEVYRSTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRDQRFKLWLSYFEIYGGKLYDLLSDRKKLCMREDGRQQVCIVGLQEFEVCDVLIVKEFIEKGSAARSTGSTGANEESSRSHAILQLAVKKHSEVKASKRNNDGNEARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPRKDQVPNAVPQTNNKEVSSTSSFPASAGAEDFNDQRQEKTMDMGRKFVEKENSLHSSAAAAVDKQPLSYSSNYLSNGGEEKGFPSASVDRERYEVKNSHGDSTSQKMNSYSQSDTDEKVQKVSPPRRKGYKDEKSERPANWMKKDANGSDLFTTSSKQQSTGNYGTVSKDEKSERPANWMKRDANGSDLVTTSSKQSTGSYSTLSKDEKSERPANWIKRDANGSDTFTTSSKQQSTGNYNNITTGSRLNETESSPDGNVSAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTKLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPRQ* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1230 872 MobiDBLite consensus disorder prediction 519 560 - -
Gso15g1230 872 MobiDBLite consensus disorder prediction 746 783 - -
Gso15g1230 872 MobiDBLite consensus disorder prediction 609 624 - -
Gso15g1230 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 519 IPR027417 -
Gso15g1230 872 MobiDBLite consensus disorder prediction 644 668 - -
Gso15g1230 872 SMART kinesin_4 183 525 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g1230 872 PANTHER KINESIN-LIKE PROTEIN 728 871 - -
Gso15g1230 872 PANTHER KINESIN-LIKE PROTEIN 657 693 - -
Gso15g1230 872 PANTHER KINESIN-LIKE PROTEIN 1 660 - -
Gso15g1230 872 PANTHER KINESIN-LIKE PROTEIN 693 729 - -
Gso15g1230 872 MobiDBLite consensus disorder prediction 672 692 - -
Gso15g1230 872 MobiDBLite consensus disorder prediction 710 729 - -
Gso15g1230 872 MobiDBLite consensus disorder prediction 523 553 - -
Gso15g1230 872 Gene3D Kinesin motor domain 165 522 IPR036961 -
Gso15g1230 872 Coils Coil 844 864 - -
Gso15g1230 872 ProSitePatterns Kinesin motor domain signature. 418 429 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso15g1230 872 Coils Coil 788 819 - -
Gso15g1230 872 MobiDBLite consensus disorder prediction 625 643 - -
Gso15g1230 872 CDD KISc_KIF2_like 185 517 - -
Gso15g1230 872 Pfam Kinesin motor domain 191 518 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g1230 872 PRINTS Kinesin heavy chain signature 266 287 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g1230 872 PRINTS Kinesin heavy chain signature 376 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g1230 872 PRINTS Kinesin heavy chain signature 419 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g1230 872 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g1230 872 PANTHER KINESIN-RELATED PROTEIN 6 1 660 - -
Gso15g1230 872 PANTHER KINESIN-RELATED PROTEIN 6 657 693 - -
Gso15g1230 872 PANTHER KINESIN-RELATED PROTEIN 6 728 871 - -
Gso15g1230 872 PANTHER KINESIN-RELATED PROTEIN 6 693 729 - -
Gso15g1230 872 MobiDBLite consensus disorder prediction 596 783 - -
Gso15g1230 872 ProSiteProfiles Kinesin motor domain profile. 185 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1230 Gso-Chr15 12315016 12328738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1230 177 519 Calmodulin-binding Proteins AT5G65930 33.613 1.86e-39 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1230 K10393 - gmx:100819897 1705.26