Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1226 ATGTTGGAGGGAGGAGCGATAATGGAGGATTCGGCGGCGCAGAAGAGGAAGCAGCAAGAGTTTGCTCTAGCGTCGGTTTCCGAGGTGTCTTCGGCTCCTTCTTCTGCTTCGCCGGGGGTTGCTCTCTTTGCTGGTGACCGTCTTCAAATTAGGAACGAATCTCACCGTGTTGCTCTCAATGCACACCTTTCAGATATTCAGCTATTCAGATTAGGTCCTATTGAATCGGTTTGCATGGTGGAAGGGTCTGAGGCTGACAAACAGACATCGTATTCCAGTGGAGTCGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGGATTCGATGTTCAAGGAGGAAACTTACCTAATGGAACTGATGTAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTTCATTATTACGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTGCAGTTCTTGAGAATCGTGCAGATTTCGTAGGTCGTGTAGTAGTTGATGTTGGTGCTGGTAGCGGCATTTTGTCACTATTTGCTGCCCAGGCTGGTGCAAAACATGTTTATGCCGTGGAAGCATCTGAAATGGCAGAATATGCACGAAAACTTGTAGCTGGGAACCCAATACTGGGTCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCTGATATTCTAATCTCTGAGCCCATGGGCACCTTGTTAGTTAACGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCATCCCTAATGGGAAAATGTTTCCTACAGTGGGAAGGATTCACATGGCTCCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTGTTTTGGCAGCAGCAAAACTATTATGGTGTTGATTTGACGCCCTTACATGGGACTGCCTTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGGTTGTTAATAGCTGCTCCTATGTTCCATGTGTTAGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAAATTGACATTCCTCTCAGATTCACAGCCACTGTGGGTGCCAGGCTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGCACGAAGGTGGCTTACCACTGCCCCTGGTTCACCTACAACCCACTGGTATCAGTTACGCTGTGTTCTCTCGCAGCCAATATATGTCATGGCAGGACAAGAAATTACTGGCAGGATGCACTTGATTGCTCACACTGCTCAGAGTTATACGATCTTTTTAACATTGTCAGCTAAAACGTGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCTTACTATAGAATGTCTCAACCACAAGCTTATCCATTAACCCAAGATCAGCAACCTCAACCGTTTTTACAGACACAGGATATAGACATCCAATCTCAAGATTTGGATGAAGTGGAGATAATGCAACAGCCTTCGCCTAAGTCGTGTGCTCAGATTGACTCCCTCATGCAGAATGCATCATAA 1635 0.4379 MLEGGAIMEDSAAQKRKQQEFALASVSEVSSAPSSASPGVALFAGDRLQIRNESHRVALNAHLSDIQLFRLGPIESVCMVEGSEADKQTSYSSGVAIQFRNEEESEAFHCVFQQWKKGFDVQGGNLPNGTDVITSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVLENRADFVGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLVAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLIPNGKMFPTVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVLDFTKIKEEELYEIDIPLRFTATVGARLHGLACWFDVLFNGSTARRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRMHLIAHTAQSYTIFLTLSAKTWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLTQDQQPQPFLQTQDIDIQSQDLDEVEIMQQPSPKSCAQIDSLMQNAS* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1226 544 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 144 459 IPR025799 GO:0016274|GO:0018216
Gso15g1226 544 MobiDBLite consensus disorder prediction 525 544 - -
Gso15g1226 544 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 8 499 IPR025799 GO:0016274|GO:0018216
Gso15g1226 544 Gene3D - 293 501 - -
Gso15g1226 544 CDD AdoMet_MTases 190 293 - -
Gso15g1226 544 Pfam Ribosomal protein L11 methyltransferase (PrmA) 187 259 - -
Gso15g1226 544 Gene3D Vaccinia Virus protein VP39 130 291 IPR029063 -
Gso15g1226 544 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 8 499 - -
Gso15g1226 544 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 154 465 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1226 Gso-Chr15 12260090 12267934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1226 151 441 C2H2 Transcription Factor Family AT3G12270 33.861 1.10e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1226 K05931 - gmx:100818828 1069.3