Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1200 ATGAGTGCATTAGCAAACCCTATTATTGATGAGACCACCGAGGGTAAAGCTTCTTCTTCTTCCTCCCCCTCACCAAAAGCAACGTTAAAACTATTCGGTTTCCTATTAACCCAAGCTGGTAATATTAATAATAATGAAGACATTCACATGCCAGCAAGTAGCACCAATATTCCTTATAGTAGTACTTACAAGAGATTCACATGCGACTTTTGCTACCGCAAATTCTCGAATTCTCAAGCTCTTGGTGGCCACCAAAATGCGCACAAGAGAGAACGCAAAATGGTCGCGCTTTCACCCTTTGGATACTACCATCATCATCATCATCCATGGTCCAAAGCACCTTCCCCAATCGTGGTTCCGCACGGAGGATTATCAGGACCGTTGATTCGTCCACGTGGGGGGCCTCACCATGAGGTTGGGTTTGTTAGACCAATGGGTGCAAGCATGGGAATAGAGACTAATATTGTTGATGGTGATGTTGATCTTAACTTGAGTTTGGCTCACACACCTTCCAATTTCAGGGACAATAAGAAAATTGCCAAGTGGAGGAGAACTTGA 558 0.4409 MSALANPIIDETTEGKASSSSSPSPKATLKLFGFLLTQAGNINNNEDIHMPASSTNIPYSSTYKRFTCDFCYRKFSNSQALGGHQNAHKRERKMVALSPFGYYHHHHHPWSKAPSPIVVPHGGLSGPLIRPRGGPHHEVGFVRPMGASMGIETNIVDGDVDLNLSLAHTPSNFRDNKKIAKWRRT* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1200 185 MobiDBLite consensus disorder prediction 1 24 - -
Gso15g1200 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Gso15g1200 185 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Gso15g1200 185 PANTHER ZINC FINGER PROTEIN 8-LIKE 13 171 - -
Gso15g1200 185 SUPERFAMILY beta-beta-alpha zinc fingers 64 94 IPR036236 -
Gso15g1200 185 PANTHER ZINC FINGER PROTEIN 5 13 171 IPR044299 GO:0010090
Gso15g1200 185 Gene3D Classic Zinc Finger 44 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1200 Gso-Chr15 11947429 11947986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1200 27 109 C2H2 Transcription Factor Family AT1G67030 39.773 6.44e-14 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1200 15 11947429 11947986 Gso9g0333 9 3227542 3228129 GST