Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1199 ATGGGAGTTGAAAAAGAAGGAACAAAAAGTGGAGGAGGTTATGCTGGTGGTTTTTTCCAGTTGTTTGATTGGAGCTCAAAATCCCGTAAGAAATTATTTGCAGCCAAGTCAGATTTACCAGAGTCTTTAAAACAGGGAAGAAAAGTCGATTACAATGTGGCAATGACACAGCCCTCCTATCTGGTTGATGACGATGAAATTGGAGTAGGGGCAAGTGTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACTGATGATGAAGCATATGGAACAAGAGCCCCTAGTGTTGTTGCCAGGCTTATGGGTTTAGATTCCTTGCCTACTTCCAGTTTTTCTGATCCTTATTCTACCCCATACTTTGATACCCGATCCCTTCAAGACTCTCATGACTTCAAGAAAAACCTTCGTCACCAGCATGACCATCATACCCCATATTCTGGAAAGCTGCTTGAAAAGGTTGAGAGCTCTTCTAGGAACTTCATGGAGCCAAAGCCGCAAAAGGCCATTACCAGGCCAATTGAAAAGTTCCAAACTGAAGTATTGCCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTCTTGTCCCCTATTAAGAATCCTGGCTTTGTTCCTACCAATAATGCGGCTTATATAATGGAGGCTGCGGCAAGAATTATTGAGCCTGGATCCCAAGTTAGTACCAAGTTCAAGACACCGCTGATAGCATCATCAACACCATTGAGAGTTAGAGATCTTAAAGATAAGGTGGAGGCTTCACAAAAAGAACCTCTAATTGGGCCATCTTCCATGACCTCTAGAACTCGAGATCTGAAAGAGAAAAGAGAAATTACTCATAGAACAACCAGGACCTCAGAATCTTCTCAAAGATCAGTCGAGTCAAATGCTGCCAAGTATCTAAAGGGACAGTCTTTGAACAGAAGCTGGAATGGATCTGCGGATACATCTGTATCCGTCAAATCTCCTACAAACGAGGAAGAAGATTCTTCTTTGAAGAATAAGGGGAAGTCCATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTTGACTGGGGGCAGAAGTTTGACAGGCCAGAAAGAGCATCCTGATGTTAAATCCAACCAACCAATGAAGGCAAGTGTTCAGAAAAATTTACACAAGAAATCTTCTGGTGCTCTTAGACAGAATAATCTGAAACAGAATTATTCAATTGACAAAGACAAATTACCATCAAAGCCATTGGTTACCAATTCAAACAGTAGGAAAGTTCTGACTGGGGATTCCTCTTATGGACGCCATAGAAGCTCTAGTAATAAATCCAATGCAAAACCTAAAGTTGGATCCAGAAAGTCAGCCATGGAGGTGACAGATAGTGAAAAGGAGGTCTTGTATACCAGCACAAACAGTTTTCCTAGAAAGAAAAGGTCTACAGACAAGGACTGGAATGATAGGGTTGTGGATAATTTGTTCATTGAAAAAATGCAGAAGCCTGCTAAGTCTAACCTAGTGAGTAATAAGCAAAATAGTTGGACTGAAGAAGTCAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCACACCATTAACAAGAAGCAATCCAGGTTTTGAGACATCTGGACAAGCTGGCCAGAATACTAATGGCCTTTCCTTGGATCAACGCATTAAAAGAGTGTTACTCGACCCAGACAATACAAAGTCTCCAATAGGATACAATATAATTGGTGGCGGTGATGCCTTAGGTATCCTTTTGGAACAGAAGTTGAGGGAATTGACTAATATGGAAACCACTTGTCATGACTCTTCTAAAGTGAGGCAACCTGCCATTACTGCACCAATTTCAGATGATCAAGTAACCAGCCATAATGTAGTTAATCTCAATCCGAGGTTGCAACAGAAAAAAGACCAAGGTGTGTTATTTTCAGACAAGTTAAGCAGTAACTATGATTCAAACATCTTCTTCACTGGTCCTCCTGAACTGTCATTGAAGCATAACTCATGGATTGATGAGATGGAATCACAGTTACTCAATTGCCGACACCCAAGTCCAATCTCTGTTCTTGAGCCTTCTTTTTCAATGGAAAGCTGTGAATCTTCATTGAGCACAGATATTACTAGTACAGAAGGAAGCAAGTTAAGCTCATCTGTTCAAGCTCACGAAGTTCATGGTTTGAATTTTTCACGGAAGTTCTATCCTTGTGAATCTGATACTGAGTTATCTGATTCAGCTTCTTCCACATCAGCTGGGAACCCGATGAGGAAGCGCACAAGTACATGTTCTGTCACGAGGTTTGGAAGGTCAAGCACATGGGAGTTGGACTACGTGAAAGATATAGTGTGTAATGTTGAGTTGATGTATATAGACTTTTCCCTTGGCCAAGCTAGCGAGGTTATAAACCCTCATCTATTCAAACAGTTGGAAGGGTGCAAGGGAGGGTTTAAGCGCGGTGACGAATCTAGGATGGCAAGGAAAGTTACATTTGATTGTGTGAGTGAATGTCTGGATTTGAGATGCAGGCGTTATGTAGGGGGAGGATACAAAATGTGGATCAAAGGGTTTGAAATGGTGAAAAGAAAAGAATGGTTGGCAGAAGATGTGTACAAGGAGATCTCAGATTGGAGTGGAATGGGAGACTCAATGGTAGATGAGCTTGTGGACAAGGACATGAGCAGCCAATATAGAAGATGGCTAGAGTATGAGGTTGATGCTTCTGAACTCGGATCAGAGGTTGTGGACCAAATATTTAATTCTTTGGTTGATGATGTTGTGACTGAAATGTTGCAATTGTAA 2805 0.4107 MGVEKEGTKSGGGYAGGFFQLFDWSSKSRKKLFAAKSDLPESLKQGRKVDYNVAMTQPSYLVDDDEIGVGASVRGSCDHSYASSVTDDEAYGTRAPSVVARLMGLDSLPTSSFSDPYSTPYFDTRSLQDSHDFKKNLRHQHDHHTPYSGKLLEKVESSSRNFMEPKPQKAITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKNPGFVPTNNAAYIMEAAARIIEPGSQVSTKFKTPLIASSTPLRVRDLKDKVEASQKEPLIGPSSMTSRTRDLKEKREITHRTTRTSESSQRSVESNAAKYLKGQSLNRSWNGSADTSVSVKSPTNEEEDSSLKNKGKSISLAIQAKVNVQRREGLSLTGGRSLTGQKEHPDVKSNQPMKASVQKNLHKKSSGALRQNNLKQNYSIDKDKLPSKPLVTNSNSRKVLTGDSSYGRHRSSSNKSNAKPKVGSRKSAMEVTDSEKEVLYTSTNSFPRKKRSTDKDWNDRVVDNLFIEKMQKPAKSNLVSNKQNSWTEEVKKKDMDVVSFTFTTPLTRSNPGFETSGQAGQNTNGLSLDQRIKRVLLDPDNTKSPIGYNIIGGGDALGILLEQKLRELTNMETTCHDSSKVRQPAITAPISDDQVTSHNVVNLNPRLQQKKDQGVLFSDKLSSNYDSNIFFTGPPELSLKHNSWIDEMESQLLNCRHPSPISVLEPSFSMESCESSLSTDITSTEGSKLSSSVQAHEVHGLNFSRKFYPCESDTELSDSASSTSAGNPMRKRTSTCSVTRFGRSSTWELDYVKDIVCNVELMYIDFSLGQASEVINPHLFKQLEGCKGGFKRGDESRMARKVTFDCVSECLDLRCRRYVGGGYKMWIKGFEMVKRKEWLAEDVYKEISDWSGMGDSMVDELVDKDMSSQYRRWLEYEVDASELGSEVVDQIFNSLVDDVVTEMLQL* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1199 934 MobiDBLite consensus disorder prediction 271 287 - -
Gso15g1199 934 MobiDBLite consensus disorder prediction 253 338 - -
Gso15g1199 934 Pfam Domain of unknown function (DUF4378) 776 926 IPR025486 -
Gso15g1199 934 MobiDBLite consensus disorder prediction 379 408 - -
Gso15g1199 934 MobiDBLite consensus disorder prediction 416 449 - -
Gso15g1199 934 MobiDBLite consensus disorder prediction 288 328 - -
Gso15g1199 934 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 932 - -
Gso15g1199 934 PANTHER EXPRESSED PROTEIN 1 932 - -
Gso15g1199 934 Pfam DUF761-associated sequence motif 83 114 IPR032795 -
Gso15g1199 934 MobiDBLite consensus disorder prediction 355 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1199 Gso-Chr15 11920460 11925821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1199 16 932 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.170 4.57e-88 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1199 - - gmx:102669513 1825.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1199 15 11920460 11925821 Gso9g0332 9 3216405 3221905 GST
Gso7g2049 7 44448782 44454967 Gso15g1199 15 11920460 11925821 PCT
Gso17g0253 17 2294024 2298872 Gso15g1199 15 11920460 11925821 PCT
Gso15g1199 15 11920460 11925821 Gso7g2049 7 44448782 44454967 PCT
Gso15g1199 15 11920460 11925821 Gso17g0253 17 2294024 2298872 PCT