Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1191 ATGGCAAAGTCTAAGAATCACACAGCGCACAATCAGTCCTACAAGGCCCACAAAAACGGCATCAAGAAACCCAAGAGGCATCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAATCAGAGGTACGCGAGGAAGCACAACAAGAAGAGCGGCGAAATTGCCACTGAGGAAGAGTGA 186 0.5 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGEIATEEE* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1191 61 MobiDBLite consensus disorder prediction 1 32 - -
Gso15g1191 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Gso15g1191 61 Gene3D - 1 61 - -
Gso15g1191 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Gso15g1191 61 MobiDBLite consensus disorder prediction 1 61 - -
Gso15g1191 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1191 Gso-Chr15 11825556 11826313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1191 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 1.76e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1191 K02905 - gmx:100499874 131.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1191 15 11825556 11826313 Gso9g0325 9 3132014 3132753 GST
Gso7g2040 7 44380183 44380962 Gso15g1191 15 11825556 11826313 PCT
Gso17g0260 17 2360339 2361027 Gso15g1191 15 11825556 11826313 PCT
Gso15g1191 15 11825556 11826313 Gso7g2040 7 44380183 44380962 PCT
Gso15g1191 15 11825556 11826313 Gso17g0260 17 2360339 2361027 PCT