Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1180 ATGAAAAATCAAATCTCTTTCCTCACCCAATTTTTCATAATCCTGCTCCTATGCTTTGCACTAGGTCCATGCATGCGCACATGCGATGCGCATACAAAGGCTTACGCCCCAGAGACAGAGCCATCTGTCGGGTTTTCACCTTCGGAGTCTCCGAACCGTGAAAACCCAACATCATCATTATCTAAGGACGAGTCACATTCTTCTTCCTCCTCCGGCAAGGACGACCGTTCATACACGTCGTTCTCGACAGCATTCTCGAATGCATTCGGGGACATCCTCAAGGGAACCCTACGAGGCAACACCATCACGATGCCGGAACACGATCTCACGGCCACCGACCACCACTCGGTTAAGGATATCTGCTCCCACACGGACTACCCTGACGTGTGTGTCTCCACCATCACACCATTCCTCGGCCAAAATTTCGACCTGATGAACGTCCTCGAGGCCGCCATTAAGGCCTGCTCCTACCAGGCCAAGTTCACCATCTCCGTCGTCGCCAAGCACATGAAGGTCTCGCCGGAGATTGCCGCAGCACTTGGGGACTGCAAGGAGCAGTACAGCGACGCCTTGGAGAACCTCCACAGGGCCATGGATGCCATTCAGTCGCAGGATCTCGGCACCGTTACCACTATGCTTAGCGCTGTTATGGCGGATGTTTCTGCGTGCGAGAGTGGGTTTGAGGAGCATAAGGTGGCATCACCCATGGCTCATTCTGAAGGCATGGTTAGCATTACTGCCAGTATTTGTCTTTCCATTGCTTCGTTGATTCCCCATTAG 780 0.5295 MKNQISFLTQFFIILLLCFALGPCMRTCDAHTKAYAPETEPSVGFSPSESPNRENPTSSLSKDESHSSSSSGKDDRSYTSFSTAFSNAFGDILKGTLRGNTITMPEHDLTATDHHSVKDICSHTDYPDVCVSTITPFLGQNFDLMNVLEAAIKACSYQAKFTISVVAKHMKVSPEIAAALGDCKEQYSDALENLHRAMDAIQSQDLGTVTTMLSAVMADVSACESGFEEHKVASPMAHSEGMVSITASICLSIASLIPH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1180 259 PANTHER PECTINESTERASE INHIBITOR-LIKE 101 258 - -
Gso15g1180 259 MobiDBLite consensus disorder prediction 43 77 - -
Gso15g1180 259 CDD PMEI-like_2 116 257 - -
Gso15g1180 259 TIGRFAM PME_inhib: pectinesterase inhibitor domain 111 254 IPR006501 GO:0004857
Gso15g1180 259 Coils Coil 184 204 - -
Gso15g1180 259 SMART PMEI_2 112 253 IPR006501 GO:0004857
Gso15g1180 259 Gene3D Invertase/pectin methylesterase inhibitor family protein 113 258 IPR035513 -
Gso15g1180 259 MobiDBLite consensus disorder prediction 38 77 - -
Gso15g1180 259 PANTHER PECTINESTERASE INHIBITOR-LIKE 101 258 - -
Gso15g1180 259 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 116 257 IPR035513 -
Gso15g1180 259 Pfam Plant invertase/pectin methylesterase inhibitor 116 253 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1180 Gso-Chr15 11627406 11628356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1180 109 227 Carbohydrate Esterase AT1G53830 25.758 2.97e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1180 - - gmx:100817067 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1180 15 11627406 11628356 Gso9g0311 9 2976175 2977190 GST