Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1178 ATGGCGTTTTGGTGGCCATTGCTCGTTCTGGCACTCGCTTTCGCCATCTGCAAGTTCCTTCTCATTCTCATTCCTCCCAAGGTTCCTTCCATCGACGTCGACGCTTCCGATGTGTTGGACGATGGGAGCCTGACGCAGGAGAACAGTTTCATATACGTGCCTCCGAGGGGAACGGCACAGCAATCGAGCGGAAAAGTTCAGTGCTATGAGCCTGCTACCATGAAATATTTGGGATATGTTCCTGCATTGACGCCGGATGAGGTCAAGGAGCAAGTGGAAAAAGTACGGAAGGCACAAAAAATGTGGGCGAAGACAAGCTTCAAGAAAAGGCGCCACTTTTTACGTATACTTTTGAAGTATATAATTAAACATCAAGCACTTATATGCGAAATATCTTCTCGCGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACAACATGTGAGAAGATAAATTGGCTACTATCAGAGGGTGAGCAGTGCCTAAAGCCTGAGTACCGGTCCTCTGGAAGAGCTATGCTTCATAAGAGATCCAAAGTAGAATTTCTCCCCCTTGGTGTTATCGGTGCCATTGTGTCGTGGAACTATCCTTTCCACAATATTTTTAACCCTATGTTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGATTTCGGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCACTTGCTGCCATAGGAGCTCCGGAGGAACTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCACTGGTAGCTTCTGCTGACAAAGTCATTTTTGTTGGATCCCCTGGGGTTGGCAAGATGATAATGAGCAATGCTGCTGAGACACTTATCCCAGTTACACTAGAGCTTGGTGGAAAAGATGTATTTATTGTTTGTGAAGATGCAGATGTGGATCATGTTGCTCAAGTTGCTGTCAGGGCTGCTCTGCAGTCAAGTGGGCAGAACTGTGCTGGGGCAGAGCGATTTTATGTCCACAGGAACATATATGCATCCTTTGTCAGTAAAGTTACCAAAATTATAAAATCTGTTACAGCTGGCCCACCACTTGCTGGAAAGTATGATATGGGAGCTTTGTGTATGCATGCACATTCTGAAAAGCTTGAAGCCCTTATAAATGATGCTTTAGACAAAGGAGCTGAAATTATTGCACGTGGAAGTTTTGGACATATAGGTGAAGATGCAGTTGATCAATATTTCCCCCCTACAGTGATTGTGAATGTGAATCACTCGATGAGATTAATGCAAGAAGAGGCGTTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGATGAAGAGGTTGTCAGGCTTGCAAATGATTCAAAATATGGGCTTGGGTGTAATGTTTTCTCAGGCAGTCAGAGCCGTGCTAGAGAGATAGCTTCCCAGATACATTGTGGGCTTGCTGCGGTTAATGATTTTGCTGCAACATACATGTGTCAGTCCCTGCCATTTGGGGGTGTGAAAAACAGTGGATTTGGACGATTCGGTGGTGTTGAGGGTTTGCGAGCATGCTGCCTTGTAAAATCTGTTGTTGAAGATAGATGGTGGCCATTCATAAAAACTGTGATACCGAAGCCTATACAGTATCCTGTTGCAGAAAATGGATTTGAGTTCCAGGAGTCGCTTGTTGAAGCACTTTACGGGCTCAGCGTATGGGACCGTTTGCAAGCATTGGTGAACGTGTTGAAAATGCTTACTGAGCAGAACTCTACAAGTGGCAGCAGAAAAAAGAAAAATGACTAA 1794 0.4426 MAFWWPLLVLALAFAICKFLLILIPPKVPSIDVDASDVLDDGSLTQENSFIYVPPRGTAQQSSGKVQCYEPATMKYLGYVPALTPDEVKEQVEKVRKAQKMWAKTSFKKRRHFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQCLKPEYRSSGRAMLHKRSKVEFLPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEELVEVITGFAETGEALVASADKVIFVGSPGVGKMIMSNAAETLIPVTLELGGKDVFIVCEDADVDHVAQVAVRAALQSSGQNCAGAERFYVHRNIYASFVSKVTKIIKSVTAGPPLAGKYDMGALCMHAHSEKLEALINDALDKGAEIIARGSFGHIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVRLANDSKYGLGCNVFSGSQSRAREIASQIHCGLAAVNDFAATYMCQSLPFGGVKNSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTVIPKPIQYPVAENGFEFQESLVEALYGLSVWDRLQALVNVLKMLTEQNSTSGSRKKKND* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1178 597 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Gso15g1178 597 SUPERFAMILY ALDH-like 61 532 IPR016161 GO:0016491
Gso15g1178 597 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
Gso15g1178 597 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Gso15g1178 597 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Gso15g1178 597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Gso15g1178 597 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Gso15g1178 597 CDD ALDH_F15-22 69 531 - -
Gso15g1178 597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 525 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1178 Gso-Chr15 11610192 11617987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1178 1 596 Aldehyde Dehydrogenase Gene Family AT3G66658 78.691 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1178 - - gmx:100797873 1188.33