Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1167 ATGCTCCATGCATTGATGAGCCTTATCGCGCGCTGTTGGAAGCCGTTCGGGCACGGTGACGATGCCGGTAATGCCGCCGCCGGAAGAGAATGCAAGGACGGCCTCCTCTGGTTCCGCGACATCGGAAAGTTTGCAGCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAACCAGGTCATCGAGGACCAGAGCCAGATCGAGTCCGGCGCCTTCGGCACCTTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGATTGCTCCCGCTACGTTTGCGATAACTTGTTCCGCAATCTCCAAGCGATATTGGCCGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCATCAGGCGTTCCGGCGGACAGAGGAGGGGTTTACGGCGCTTGTTTCGGAGCTGTGGAGCTCTCGGCCGCAGATTGCGACTACTGGGACGTGTTGTTTGGTTGGGGTTATTTGTCGGCAGACACTCTTTGTGGCAAGTCTTGGAGATTCCCGTGCTGTGTTGGGTAGGAGAGTTGGCAACACCGGTGGGATGGCCGCGATTCAGTTGTCTACGGAGCACAATGCGAATTTTGAGGCTGTCAGGCAGGAGCTTAAGGAATTGCACCCGAATGACCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAGGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTTTAACCGAGAACCCATTAATGCAAAATTCAGACTCCCCGAACCAATGAACATGCCTTTCTTGTCTGCTAATCCAACTATTCTTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGATCAAGCAGTGGATATTGTTCACAGCAGTCCATGCGCGGGTAGTGCGAAGAAACTTGTCAAGGCTGCCCTACAAGAAGCAGCAAGAAAACGTGAAATGCGATATTCAGACCTTTACAAGATTGACAAGAAGGTTCGTCGCCATTTTCACGACGATATAACTGTTATTGTTTTATTCTTAAACCACAACCTTATATCCAGGGGTGCAGTTCTAAATACACCACTTACAATTCGTAGTGCTCTCGATCACTGA 1119 0.5076 MLHALMSLIARCWKPFGHGDDAGNAAAGRECKDGLLWFRDIGKFAAGDFSMAVVQANQVIEDQSQIESGAFGTFVGVYDGHGGPDCSRYVCDNLFRNLQAILAESQSVVTSEAIHQAFRRTEEGFTALVSELWSSRPQIATTGTCCLVGVICRQTLFVASLGDSRAVLGRRVGNTGGMAAIQLSTEHNANFEAVRQELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINAKFRLPEPMNMPFLSANPTILSHPLQPNDSFLIFASDGLWEHLSNDQAVDIVHSSPCAGSAKKLVKAALQEAARKREMRYSDLYKIDKKVRRHFHDDITVIVLFLNHNLISRGAVLNTPLTIRSALDH* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1167 372 Pfam Protein phosphatase 2C 73 318 IPR001932 -
Gso15g1167 372 SUPERFAMILY PP2C-like 57 350 IPR036457 -
Gso15g1167 372 PANTHER ALPHABET, ISOFORM E-RELATED 3 372 - -
Gso15g1167 372 CDD PP2Cc 49 349 IPR001932 -
Gso15g1167 372 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Gso15g1167 372 Gene3D - 42 357 IPR036457 -
Gso15g1167 372 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 372 - -
Gso15g1167 372 SMART PP2C_4 42 347 IPR001932 -
Gso15g1167 372 ProSiteProfiles PPM-type phosphatase domain profile. 48 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1167 Gso-Chr15 11436631 11442743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1167 1 369 PP2C-type Phosphatase Gene Family AT4G38520 58.839 5.28e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1167 K01102 - gmx:100813333 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1167 15 11436631 11442743 Gso9g0298 9 2865519 2871163 GST
Gso7g2017 7 44208921 44213608 Gso15g1167 15 11436631 11442743 PCT
Gso17g0283 17 2522971 2527386 Gso15g1167 15 11436631 11442743 PCT
Gso15g1167 15 11436631 11442743 Gso7g2017 7 44208921 44213608 PCT
Gso15g1167 15 11436631 11442743 Gso17g0283 17 2522971 2527386 PCT