Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1164 ATGTCGTCATCTCTGATCGCGAATCCAACTGCGGATCGGTCGCGTGACTCTCACCGCACAAAGAAGAAGAAGAAATCCCTTAAGCAACACCAACTACAGCATGAGCAGAGCCACGCCAAATGGAAATCCCACGCGCAACAACAGCTATACTCCTCCAAGCTCCACCATGCTCTGGCGCGTGTCAACATCTCCGGCGACGCGCCGCGCCGCGGCAGGGCGGTGCGCGAGGCGGCCGACAGGGTTCTCGCCGTCGCCGCGAAGGGGAGAACGCGGTGGAGCCGCGCCATCCTGACTAACCGGCTCAAGCTGAAGTTCAGGAAGCCGATTCACAAGAGGCAGAAGGTTGTTGTTGGGCCGGGCCGGCCCAAGAAGGCCCGGTTCAGCGTTCTCCGGCTCAAGGGGAAAACCCTGCCCGCGGTCCAGAGGAAGGTTAGGGTTCTGGGCCGGTTGGTTCCCGGTTGCAGAAAAGAACCGCTTCCCGTGATTCTCGAAGAGGCCATCGATTACATACCCGCGCTCGAGATGCAGGTTCGCGCCATGCAAGCTCTCGCTGACTTACTCTTAGGCTCTTCCTCCGCCTCAACCTCCGCCGCCGCGCCGCCAAGTTGA 609 0.6092 MSSSLIANPTADRSRDSHRTKKKKKSLKQHQLQHEQSHAKWKSHAQQQLYSSKLHHALARVNISGDAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPIHKRQKVVVGPGRPKKARFSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSAAAPPS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1164 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 9 200 IPR044660 GO:0006355
Gso15g1164 202 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 9 200 - -
Gso15g1164 202 MobiDBLite consensus disorder prediction 1 45 - -
Gso15g1164 202 CDD bHLH_AtIBH1_like 129 184 IPR044549 GO:0006355
Gso15g1164 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 190 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1164 Gso-Chr15 11408849 11410016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1164 37 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 57.669 9.13e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1164 - - gmx:100792237 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1164 15 11408849 11410016 Gso9g0296 9 2843820 2845607 GST
Gso7g2012 7 44169422 44170540 Gso15g1164 15 11408849 11410016 PCT
Gso17g0290 17 2568866 2569871 Gso15g1164 15 11408849 11410016 PCT
Gso15g1164 15 11408849 11410016 Gso7g2012 7 44169422 44170540 PCT
Gso15g1164 15 11408849 11410016 Gso17g0290 17 2568866 2569871 PCT