Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1135 ATGTGCAGCAGCATCTTTGGGCCAATAATCATGGACAATTACCAAGGTGACTTAACTGACATACTCCGAGCCAGTGGTGGAGCATATGGTAGCACAGGCACAGGCACAGGCACTTCATCATCTGATCAATTACCTACTACATCTCATCATCTTCATCATCATTCCTCTCACACCACCCTCTCTCATAATGATCACTGGCACCACCAACACTTCTCTTCTTCTTCTTCTTCTGATCCCATCACTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCGGTGCTAATTCAAGACCCTATGAGAGGAGCCACAAACTTTGGTGATCCTTTCTCAATCATGAGAGATCCCTTCCTTCAGGTGCTTGACATGCCTTCTTCAGCTTCTGCCTACTTCACTGGTGGCTTGGAATTAGAAGCAGCTGCAACTTTTGGTGCTGCAGTCAATACTAATTCTAATACTGCTACTAGTTCTACTACTAATACTAATACTACTACCACTACTGTTTTTGCTGCTGCACACAAGATGCTTGTGGAACATGACAACAATAGCATGAGAAGGCCTTGTAAAAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCAAAGTTACCAGTCTCACCCTATGATTCCACCACCACAGCCATGGCACCTTCTCCAAGGCCAATTAAGCCTCCTGCTGTGGTTTCACCCAACATTATGCTGAATGCAAACACCTCCAAGGAGTGCCTTGTGGACACCACAGGAATGCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCTAAAAAGGTTGTTTGTATTCCTGCACCAGCAGCTACAAACAGCAGACAGACTGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTACTACAGATGCAGCAGCTCTAAGGGTTGCTCTGCGAGGAAGCAAGTTGAGAGGAGCAGGAATGATCCAAACATGTTGGTTATCACATACACATCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCAACAAGATCACAGCCATCCAAGAACAACAACAATGCTGCTTCCAATTCAAAGAATTCAGAAGGCTCAAACCCCCAAAAGGGCACAGCTACAAGAACAAAGGATGAAGAAGAGAGCAACAATAATAACAATAGTGAGGGAAATGTGTCCCCAGTTATGGCTGGGAACTCATCAAACAGTGTGAAGGAAGAGAATATGGAAGACATAGAGAGGCATCAGATTGAGATGGATGAGGGAGAGTTTAGTGATGGACTCCCTTATAAGCCTAGTTTGATGGATCAGAGTACTAATAACCAACAATCTGAGGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCACTTGACCTTTTGTTCACACAGGGTTTTGGTGGTGCTGATGATCAAAGGGAATCCAAGTCCTTAGATCCATTTCATCTCTTTGACTGTCAAGGAGATAAAATTAGTAGAGTGAAAAAAAAAAAAGAGTGCTGGTTGATTGGAAGCAAACTCAACGAGTCCCACATTCCTTTTGGAATATTGGTGGATGGGACAGAAAGCTGA 1614 0.4399 MCSSIFGPIIMDNYQGDLTDILRASGGAYGSTGTGTGTSSSDQLPTTSHHLHHHSSHTTLSHNDHWHHQHFSSSSSSDPITFSSSSSSSSSVLIQDPMRGATNFGDPFSIMRDPFLQVLDMPSSASAYFTGGLELEAAATFGAAVNTNSNTATSSTTNTNTTTTTVFAAAHKMLVEHDNNSMRRPCKNIFSNMIQISPNAKLPVSPYDSTTTAMAPSPRPIKPPAVVSPNIMLNANTSKECLVDTTGMQISSPRNPGLKRRKNQAKKVVCIPAPAATNSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRNDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNAASNSKNSEGSNPQKGTATRTKDEEESNNNNNSEGNVSPVMAGNSSNSVKEENMEDIERHQIEMDEGEFSDGLPYKPSLMDQSTNNQQSEDFFAELGEIEADPLDLLFTQGFGGADDQRESKSLDPFHLFDCQGDKISRVKKKKECWLIGSKLNESHIPFGILVDGTES* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1135 537 Gene3D WRKY domain 261 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso15g1135 537 SUPERFAMILY WRKY DNA-binding domain 285 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso15g1135 537 MobiDBLite consensus disorder prediction 304 452 - -
Gso15g1135 537 MobiDBLite consensus disorder prediction 331 385 - -
Gso15g1135 537 MobiDBLite consensus disorder prediction 419 438 - -
Gso15g1135 537 MobiDBLite consensus disorder prediction 57 71 - -
Gso15g1135 537 ProSiteProfiles WRKY domain profile. 282 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso15g1135 537 Pfam WRKY DNA -binding domain 289 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso15g1135 537 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 503 IPR044810 GO:0003700
Gso15g1135 537 MobiDBLite consensus disorder prediction 32 46 - -
Gso15g1135 537 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 15 503 - -
Gso15g1135 537 MobiDBLite consensus disorder prediction 32 72 - -
Gso15g1135 537 SMART WRKY_cls 287 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso15g1135 537 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1135 Gso-Chr15 10922594 10926899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1135 1 484 WRKY Transcription Factor Family AT2G34830 40.041 1.18e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso15g1135 WRKY 2.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1135 - - gsj:114386850 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1135 15 10922594 10926899 Gso9g0257 9 2434319 2438784 GST