Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1118 ATGGTTCTGAAACTTGTTTATATCATCATTGTGATGATAGGGCGGATGTATCCATTAACATGTGCACAATATCAGAATCAGGCTATAATATCTGCACAAAATCAGAAAGAGACTATAGCACGATTCGGTTGCGATTCGAAATGTGGAAATGTTTCCATTCCTTACCCTTTCGGAATGCGCAAACCCAAATGCTATGCAAGCGAGCCGTTTGAAATAGAATGCAGACACAATAAAAATGGTTCTCAAGGTGAGAAACTGATCGCACCCTACCTCAAGTATATAAATCTAGAGGTAATGTACATTGATCTTGAATACGGTACGGTCGGGATCAAGAATCCAATTTTTCACCCTGGTTGCGACAACACTAGTACAGGCATAAATCTCGAAGGTGGTCCTTTCGTGTATTCCCAGGATTACAACTCATTTGTGACCGTAGGTTGCCAAAACGCAGCCTTGTTGTTGTCAAACGACACGATACTTACTGCCTGTGTGTCCGTGTGTTACGACGACCCAAAAAATGCCAATATGATGGACGTGTCAAGTTGTCGCGGCAAGTACTGCTGTGAGACTTCACTGCCACCGTACCTTCAAGCATACAACGTCTCAGTTGGAACTGTAGAAGTGAAAAGTGAGATCAAACCAGAGTGCGGTTATGGGCTGATTAAAGCAGATTATTTTCAGTTCAATTACGTGTACGATGAATACAATTCAAGTTACTGGGTTCCTACTCTTGGGAACCTAAAGAAAGTAAAAGATGTTCCTGCGGTGCTTCAATGGGAGATTCCGATTCACATGCCCAACAATTCCTTCCCCGAATTCCGTACAGATGCGGATTCATATGCCAACTACAACTGCAGTTACACTAATGTTACATCTGCACAATCAAAATCGGGTTGGAGATGTACATGCAAATATGGCTTCAAGGGAAATCCCTACCTTGACCAAGGCTGTAAATTAGCTATGGAGGATTCTCCTGAAAGAAACAAAACTCGATTAAAGTGGGCCATAGGAGTTTCTTCAAGCCTCGGAACCGTCATTTTACTCCTTGGTTTGTGGTGGTTGCATAAAGTTATAAGGAAAAGTATAGCAACGAAACGCAAGGAAAAATTCTTCAAACAAAATGGAGGGTTGTTGTTAAAACAAAGACTCTCTTCAGGTGAAGTTAATGTTGACAAAATTAAACTGTTTAGCCTAAAGGACTTACAGAAGGCCACCGATCACTTTAATATAAATAGGGTACTTGGGAAGGGAGGCCAAGGTACTGTTTACAAAGGGATGCTAGTAGATGGAAATATTGTTGCAGTGAAAAAATTTAAGGTCAACGGGAAGGTTGAAGAATTCATCAATGAATTTGTCATTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAGACTGAAATCCCTTTGCTTGTTTATGAATTCATTCCCAATGGTAACCTTTTCGAATATATACATGGACAAAATGAGGACTTACCAATGACATGGGAAATGCGTTTGAGAATTTCCATTGAAGTTGCTGGAGCTCTATTTTACTTGCATTCAGCTGCTTCTCAACCCATTTATCACAGAGACATCAAGTCAAGAAATATACTATTGGATGGGAAATATAGGGCAAAAGTAGCAGACTTTGGTGCATCAAGAATGGTTTCCATTGAAGCTACTCATCTCACTACTACAGTTCAAGGAACTTTTGGATACTTAGACCCTGAATACTTCCGTACTAGTCAATTAACAGATAAGAGTGATGTCTACAGCTTTGGAGTGGTTCTTATTGAACTTTTAACAGGGAAAGAGCCAATATCCTCTGCGAAACAACAAGAACTTAAAAGTTTAGTTTCATATTTTCTCCTCTCTATGGAGGAAAATCGCTTGTTTGATATTGTAGATGAAAGAGTCATGAAGGAAGCGGAGAAAGAACACATCGTTGTAGTTGCCAATCTTGCAAGAAGATGCTTAGAGTTGAATGGGAAAAGACGACCAACTATGAAAGAAGTCGCATTAGAATTGGAAAGTATCCAAAAATCAAAGAAACAGTCTGCTGCACAAGAACAACATGAAGAACTTGAGCTTCCTGGAATTGATGACTTCCAACTTTGA 2118 0.3966 MVLKLVYIIIVMIGRMYPLTCAQYQNQAIISAQNQKETIARFGCDSKCGNVSIPYPFGMRKPKCYASEPFEIECRHNKNGSQGEKLIAPYLKYINLEVMYIDLEYGTVGIKNPIFHPGCDNTSTGINLEGGPFVYSQDYNSFVTVGCQNAALLLSNDTILTACVSVCYDDPKNANMMDVSSCRGKYCCETSLPPYLQAYNVSVGTVEVKSEIKPECGYGLIKADYFQFNYVYDEYNSSYWVPTLGNLKKVKDVPAVLQWEIPIHMPNNSFPEFRTDADSYANYNCSYTNVTSAQSKSGWRCTCKYGFKGNPYLDQGCKLAMEDSPERNKTRLKWAIGVSSSLGTVILLLGLWWLHKVIRKSIATKRKEKFFKQNGGLLLKQRLSSGEVNVDKIKLFSLKDLQKATDHFNINRVLGKGGQGTVYKGMLVDGNIVAVKKFKVNGKVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLFEYIHGQNEDLPMTWEMRLRISIEVAGALFYLHSAASQPIYHRDIKSRNILLDGKYRAKVADFGASRMVSIEATHLTTTVQGTFGYLDPEYFRTSQLTDKSDVYSFGVVLIELLTGKEPISSAKQQELKSLVSYFLLSMEENRLFDIVDERVMKEAEKEHIVVVANLARRCLELNGKRRPTMKEVALELESIQKSKKQSAAQEQHEELELPGIDDFQL* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1118 705 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 22 688 - -
Gso15g1118 705 Pfam Protein kinase domain 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1118 705 CDD STKc_IRAK 414 679 - -
Gso15g1118 705 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 688 IPR045274 GO:0007166
Gso15g1118 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Gso15g1118 705 Pfam Wall-associated receptor kinase galacturonan-binding 44 110 IPR025287 GO:0030247
Gso15g1118 705 SMART serkin_6 408 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1118 705 Gene3D Phosphorylase Kinase; domain 1 380 481 - -
Gso15g1118 705 SUPERFAMILY Protein kinase-like (PK-like) 392 674 IPR011009 -
Gso15g1118 705 Gene3D Transferase(Phosphotransferase) domain 1 482 701 - -
Gso15g1118 705 ProSiteProfiles Protein kinase domain profile. 408 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1118 705 MobiDBLite consensus disorder prediction 683 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1118 Gso-Chr15 10723268 10728938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1118 44 680 Receptor kinase-like Gene Family AT1G69730 44.056 1.04e-178 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso15g1118 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1118 - - gmx:100801993 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1118 15 10723268 10728938 Gso9g0239 9 2271773 2275759 GST