Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1097 ATGGCTAACTATTCCCACCCTCATATCTGCCAATGTCTGAGTCACTTGCTGACCCTCCGGCAACATTTTCCGGTCATAATTGCCGGAAACCGCCGCAAGACCGGCCAAGAGTTGGTGGAGGAAGTGTTGTCCTTGGCACAAGGCCTGCTCCACCTTGGACTCACATCTGGCCAAGTGGTTGCCATCTCTGCTTTCAATAGTGATAGGTATCTGGAGTGGTTATTAGCCATTGCATTTGTTGGAGGAATAGCTGCTCCTCTGAACTATCGCTGGAGTTTTGAAGAGGCAAGATTAGCAATGGCTGCAGTGAAGCCTGTGTTGTTAGTGATTGATGAGAGCAGTTACACATGGTACTCAAAACTCCAGCAAAATGATGTTCCATCTCTGAAGTGGCATATTTTGTTGGATTCCCCTTCCTCAGATTTTTCTAAGTGGAACGTGTTAACTCCAGAAATGCTCAAGAGGCATCCTATAAAACTTCTACCATTTGACTACTCTTGGGCGCCTGACGGCGCTGTCATAATATGCTTCACTTCAGGAACTACGGGAAAGCCTAAGGGAGTCACCCTTAGTCATGGAGCTTTGACCATACAATCCCTAGCCAAGATTGCCATAGTTGGCTACAATGTGGATGATGTCTATCTTCATACTGCTCCATTATGCCATATTGGTGGCTTGTCATCAGCCATGACCATGCTTATGGTTGGAGGTTGCCATGTCTTGATGCCAAAATTTGATGCAGAATCAGCTGTTGATGCCATAGAGCAACATGCAGTGACATCTTTTATCACAGTTCCTGCAATAATGGCCAGTCTGATTTCTATAATTAGTTTTAATATTTTTAGGCACAAAGAGACCTGGAAAGGGGGAGAAACTGTCAAGAAAATTCTTAATGGGGGTGGAAGCCTCTCACATGAGCTCATCAAGGACACCAGCATATTCTTCCACAAAGCTAAACTTATTTCAGCTTATGGGATGACAGAGACATGTTCTTCATTGACATTCCTGACACTCTATGACCCCATGCATGAAACAACAAACCAGTCCCTTCAAGCATTTGGTGTGGCAGGATCTAAGCTCATTCACCAGCAACAAGGTGTTTGTATTGGCAAGGCTGCACCCCATATAGAACTGAAGATAAGTGCAGATGCTTCTGGTCACACTGGGAGAATTTTAACTAGAGGACCACATATAATGCTCAGGTATTGGGACCAAACTCTCACAAATCCATTAAATCCGAATAAAAGAGCCTGGCTTGACACAGGTGACATTGGATCAATTGATCATTATGGTAATTTGTGGCTCCTTGGTCGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAGGCAATTCTACAGCAACATCCAGGGATTGCAAGTGTTGTTGTTGTGGGAATCCCAGATGCTCACCTGACAGAGATGGTAGCAGCATGTATCCAACTAAGAGAAAATTGGCAATGGTCAGAGCAGTTGTCTGCTTCAAATGAAGAGTTTCTCCTATCTAGAAAGAATATTCAGCAATACTGTATAGAAAATCATTTAAGCAGGTTTAAGATACCAAAAATGTTTATTGTATGGAGAAAGCCATTTCCACTCACTACAATAGGGAAAATAAAAAGAGATCAAGTCAGAAAGGAAGTTATGTCTCAACTACAATCTTTACATAGTAATCTTTGA 1698 0.4299 MANYSHPHICQCLSHLLTLRQHFPVIIAGNRRKTGQELVEEVLSLAQGLLHLGLTSGQVVAISAFNSDRYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMAAVKPVLLVIDESSYTWYSKLQQNDVPSLKWHILLDSPSSDFSKWNVLTPEMLKRHPIKLLPFDYSWAPDGAVIICFTSGTTGKPKGVTLSHGALTIQSLAKIAIVGYNVDDVYLHTAPLCHIGGLSSAMTMLMVGGCHVLMPKFDAESAVDAIEQHAVTSFITVPAIMASLISIISFNIFRHKETWKGGETVKKILNGGGSLSHELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYDPMHETTNQSLQAFGVAGSKLIHQQQGVCIGKAAPHIELKISADASGHTGRILTRGPHIMLRYWDQTLTNPLNPNKRAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIPDAHLTEMVAACIQLRENWQWSEQLSASNEEFLLSRKNIQQYCIENHLSRFKIPKMFIVWRKPFPLTTIGKIKRDQVRKEVMSQLQSLHSNL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1097 565 SUPERFAMILY Acetyl-CoA synthetase-like 8 559 - -
Gso15g1097 565 Pfam AMP-binding enzyme 24 445 IPR000873 -
Gso15g1097 565 CDD AFD_class_I 170 546 - -
Gso15g1097 565 ProSitePatterns Putative AMP-binding domain signature. 175 186 IPR020845 -
Gso15g1097 565 Gene3D - 10 439 IPR042099 -
Gso15g1097 565 PANTHER ACYL-COA SYNTHETASE 6 556 - -
Gso15g1097 565 Pfam AMP-binding enzyme C-terminal domain 454 544 IPR025110 -
Gso15g1097 565 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 6 556 - -
Gso15g1097 565 Gene3D - 441 558 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1097 Gso-Chr15 10475161 10481769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1097 45 472 Monolignol Biosynthesis Gene Families AT3G21240 29.932 2.23e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1097 K14760 - gmx:100809925 1123.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1097 15 10475161 10481769 Gso9g0211 9 1941822 1947747 GST