Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1089 ATGAAATTTGTGGCGAGTGTTTACCTCACACTGTGCCTAGCCTCTTCTTTTATCATGATGATGGCCACAGTACAAAGGGCAAGGTTGTTGTTTGCGACAAATGAATACTATGTTCGAGTGATCAATGGTTTCAGTGACAATTCCTCTGTGCCTTTGGTGATTTGGTGTGCTTCGGAGGAGATGGATCTTGGAGGGCGTGCTCTGCAGGAGCACGATGATTTCAGCTGGGTGATGAGGCCGAATTTCTGGAGCAGCAACCGCATGAAGTGCACGATGAAATGGGACAACACGAGGAAGAGCTTCGAGGCGTTTAAGGCTTCCAGGGACACTGATCGCTGTGGGATTCATAGGATGTGTTCTTGGATGGTGACTCAAGATGGGTTCTATTTCAGCAATGATGAGGTTAATTGGAGGAAGGATTTCTTGTGGTGA 432 0.4722 MKFVASVYLTLCLASSFIMMMATVQRARLLFATNEYYVRVINGFSDNSSVPLVIWCASEEMDLGGRALQEHDDFSWVMRPNFWSSNRMKCTMKWDNTRKSFEAFKASRDTDRCGIHRMCSWMVTQDGFYFSNDEVNWRKDFLW* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1089 143 PANTHER BNAA01G23250D PROTEIN 7 143 - -
Gso15g1089 143 PANTHER - 7 143 IPR010264 -
Gso15g1089 143 Pfam Plant self-incompatibility protein S1 38 143 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1089 Gso-Chr15 10397566 10398209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1089 50 127 Carbohydrate Esterase AT3G16970 30.380 6.84e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1089 - - gmx:100792052 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1089 15 10397566 10398209 Gso9g0203 9 1881082 1881666 GST