Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1081 ATGAAGTCTTTCCATCTCACAGTGACAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGTGCTTCCACTCTCCCTAGATGCACAACTAGATCCCTCCTTTTACAGAGACACTTGTCCCAGGGTTCACTCCATTGTTCGTGAAGTCGTCAGGAACGTTTCAAAGAAAGATCCCCGTATGCTTGCTAGTCTCATTAGACTTCACTTTCATGACTGCTTTGTTCAAGGATGTGATGCATCAGTTTTGTTGAACAACACTGCCACCATAGAGAGCGAGCAACAAGCTCTGCCAAACAACAACTCACTAAGAGGTTTGGATGTTGTGAACGACATTAAGACAGCAGTGGAAAAGGCTTGTCCCGGCGTGGTTTCTTGTGCTGATATTCTTACCCTTGCATCCGAAATATCTTCTGTTCTGGGTGGTGGTCCTGATTGGAAAGTTCCATTGGGAAGAAGAGATAGTTTAACAGCAAACCGAAACCTTGCAAATCAAAACCTTCCAGCTCCATTCTTCAACCTATCTCGACTTAAATCTGCCTTTGCTGTTCAAGGTCTTGACACCACTGATCTAGTTGCACTCTCAGGTGCTCATACATTCGGCAGAGCTCACTGCAATTTCATTCTTGACCGATTGTACAATTTCAGTGGAACTGGCAAACCTGATCCAACTCTTGACACAACTTACTTACAACAATTGCGCCAAATATGCCCCAATGGTGGACCTAACAACCTTGTCAATTTTGACCCTGTCACTCCTGATAAAATTGACAGGGTCTACTTCTCCAATCTTCAGGTTAAGAAGGGCTTGCTTCAGAGTGATCAAGAGCTGTTCTCGACACCTGGTGCCGATACCATCCCCATTGTCAACAGGTTCAGCAGTGACCAGAAAGTTTTCTTTGACGCCTTTGAGGCTTCAATGATTAAGATGGGTAACATTGGTGTGCTCACTGGGAAGAAAGGAGAAATCAGAAAACATTGTAACTTTGTTAACAAGAAATCTGTTGAAGTTGATATTGCTAGTGTGGCCTCAGAAGAATCATCAACAGAGGGTATGGTTACCTCAATCAACAAATTACTGATAGAAAAAATGAAAGTAACAGTTGTGTGTTGTGTATTGGTTGTGCTAGTTGGTGCACTACCATTCTCTTCAGATGCACAACTAGACCCCTCCTTTTATAGGGACACATGTCCCACAGTGCATTCTATTGTACGTGAAGTTGTTAGAAACGTTTCTAAATCAGACCCCCGAATGCTTGCTAGTCTCATAAGGCTCCACTTTCATGACTGCTTTGTTCAAGGCTGTGATGCATCAATTTTGTTGAACAACACTGCCACAATAGAAAGTGAGCAACAAGCTTTTCCAAACAACAACTCAATAAGAGGTTTGGATGTTGTGAACCAGATCAAGACTGCGGTGGAAAATGCTTGTCCTGGTGTTGTTTCTTGTGCTGATATTCTTGCCCTTGCTGCTGAGATATCTTCTGTTCTGGCTCATGGTCCTGATTGGAAAGTTCCATTGGGTAGAAGGGACAGTTTAACAGCAAACAGAACACTTGCAAATCAAAATCTTCCAGCTCCATTCTTCAATCTTACTCAACTCAAAGATGCCTTTGCTGTTCAAGGTCTCAACACTACTGATCTAGTAGCACTCTCAGGTGCTCATACAATTGGCAAAGCTCAGTGCAGATTTTTCGTCGACCGATTATACAATTTCAGCAACACTGGCAACCCTGATCCAACTCTTAACACAACCTACTTGCAAACACTTAGTGCAATATGCCCCAATGGTGGACCTGGCACTAACCTCACCAATTTTGACCCAACCACACCTGACACATTGGACAAGAACTACTACTCCAATCTTCAGGTTCACAAGGGCTTGCTTCAGAGTGATCAAGAGCTGTTTTCCACAACCGGTGCCGATACCATATCCATTGTCAATAGCTTCAGCAGTAACCAAACTCTTTTCTTTGAGAACTTCAAGGCTTCAATGATAAAAATGGGTAACATTGGAGTGCTAACGGGATCTCAAGGAGAAATCAGACAACAATGTAATTTTGTTAATGGGAATTCTGCTGGACTGGCCACTCTGGCCACCAAAGAATCATCAGAATATGGCATGGTTAGCTCAATCTAA 2133 0.4313 MKSFHLTVTALCCVVVVLGVLPLSLDAQLDPSFYRDTCPRVHSIVREVVRNVSKKDPRMLASLIRLHFHDCFVQGCDASVLLNNTATIESEQQALPNNNSLRGLDVVNDIKTAVEKACPGVVSCADILTLASEISSVLGGGPDWKVPLGRRDSLTANRNLANQNLPAPFFNLSRLKSAFAVQGLDTTDLVALSGAHTFGRAHCNFILDRLYNFSGTGKPDPTLDTTYLQQLRQICPNGGPNNLVNFDPVTPDKIDRVYFSNLQVKKGLLQSDQELFSTPGADTIPIVNRFSSDQKVFFDAFEASMIKMGNIGVLTGKKGEIRKHCNFVNKKSVEVDIASVASEESSTEGMVTSINKLLIEKMKVTVVCCVLVVLVGALPFSSDAQLDPSFYRDTCPTVHSIVREVVRNVSKSDPRMLASLIRLHFHDCFVQGCDASILLNNTATIESEQQAFPNNNSIRGLDVVNQIKTAVENACPGVVSCADILALAAEISSVLAHGPDWKVPLGRRDSLTANRTLANQNLPAPFFNLTQLKDAFAVQGLNTTDLVALSGAHTIGKAQCRFFVDRLYNFSNTGNPDPTLNTTYLQTLSAICPNGGPGTNLTNFDPTTPDTLDKNYYSNLQVHKGLLQSDQELFSTTGADTISIVNSFSSNQTLFFENFKASMIKMGNIGVLTGSQGEIRQQCNFVNGNSAGLATLATKESSEYGMVSSI* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1081 710 ProSiteProfiles Plant heme peroxidase family profile. 385 687 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 Pfam Peroxidase 45 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 Pfam Peroxidase 402 650 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 Gene3D - 390 687 - -
Gso15g1081 710 Gene3D - 33 329 - -
Gso15g1081 710 PANTHER PEROXIDASE 72-RELATED 363 695 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PANTHER PEROXIDASE 72-RELATED 7 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 CDD secretory_peroxidase 385 686 IPR033905 GO:0004601|GO:0042744
Gso15g1081 710 ProSitePatterns Peroxidases proximal heme-ligand signature. 545 555 IPR019793 -
Gso15g1081 710 Gene3D Peroxidase, domain 2 523 666 - -
Gso15g1081 710 Gene3D Peroxidase, domain 2 166 308 - -
Gso15g1081 710 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Gso15g1081 710 PANTHER PEROXIDASE 363 695 - -
Gso15g1081 710 PANTHER PEROXIDASE 7 337 - -
Gso15g1081 710 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601|GO:0042744
Gso15g1081 710 SUPERFAMILY Heme-dependent peroxidases 385 687 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Plant peroxidase signature 395 414 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Plant peroxidase signature 419 439 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Plant peroxidase signature 459 472 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Plant peroxidase signature 478 488 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Plant peroxidase signature 497 512 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Plant peroxidase signature 544 556 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Plant peroxidase signature 603 618 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Plant peroxidase signature 619 636 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 PRINTS Plant peroxidase signature 661 674 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1081 710 ProSiteProfiles Plant heme peroxidase family profile. 28 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1081 Gso-Chr15 10269462 10284022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1081 371 688 Peroxidase AT5G06720 60.692 6.07e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1081 - K00430 aprc:113852209 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1081 15 10269462 10284022 Gso9g0194 9 1767368 1772847 GST