Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1080 ATGTATCAGGATCAAAACGTTCCATTAGGAAGAAGGGATAGCTTAACAGCAAACCGAACTCTTGCAAATCAAAATCTTCCAGCACCCTTCTTCACATTGGATAAACTCAAAGCTGCCTTTGCTGTTCAAGGTCTCAACACCCTTGATTTAGTTACACTCTCAGGTGGTCATACGTTTGGAAGAGCTCGTTGCAGTACATTCATTAACCGATTATACAACTTCAACAACACTGGAAACCCTGGTCCAACTCTGAACACAACTTACTTAGAACTATTGCGTGCGAGATGCCCCCAGAATGCAACTGAGAATAACCTCACCAGTTTGGACCTGACCACACCTGATCAATTTGACAACAGATACTACTCCAATCTTCAGCAGCTAAATGGCTTGCTTCAGAGTGACCAAGAACTTTTCTCCACTCCTGGTGCTGATACTATTCCCATTGTCAACAGCTTCATCAGTAACCAGAATACTTTCTTTGCCAACTTTAGAGTTTCAATGATAAAAATGGGTAATATTGGAGTTCTGACTGGGGATGAAGGAGAAATTCGCTCGCAATGTAATTTTGTGAATTACTGA 579 0.4145 MYQDQNVPLGRRDSLTANRTLANQNLPAPFFTLDKLKAAFAVQGLNTLDLVTLSGGHTFGRARCSTFINRLYNFNNTGNPGPTLNTTYLELLRARCPQNATENNLTSLDLTTPDQFDNRYYSNLQQLNGLLQSDQELFSTPGADTIPIVNSFISNQNTFFANFRVSMIKMGNIGVLTGDEGEIRSQCNFVNY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1080 192 SUPERFAMILY Heme-dependent peroxidases 5 191 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 PANTHER PEROXIDASE 6 191 - -
Gso15g1080 192 PANTHER PEROXIDASE 72-RELATED 6 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 PRINTS Plant peroxidase signature 1 16 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 PRINTS Plant peroxidase signature 48 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 PRINTS Plant peroxidase signature 107 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 PRINTS Plant peroxidase signature 123 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 PRINTS Plant peroxidase signature 165 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 ProSiteProfiles Plant heme peroxidase family profile. 1 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 Gene3D - 5 191 - -
Gso15g1080 192 PRINTS Haem peroxidase superfamily signature 1 13 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 PRINTS Haem peroxidase superfamily signature 49 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 PRINTS Haem peroxidase superfamily signature 109 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 Pfam Peroxidase 6 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g1080 192 ProSitePatterns Peroxidases proximal heme-ligand signature. 49 59 IPR019793 -
Gso15g1080 192 Gene3D Peroxidase, domain 2 27 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1080 Gso-Chr15 10259299 10261396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1080 7 191 Peroxidase AT5G06730 61.081 1.34e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1080 K00430 - gmx:100788891 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1080 15 10259299 10261396 Gso15g1080 15 10259299 10261396 ECH