Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1065 ATGGCTGAGTTTGTCCTTGAAACTTTGCTTGGCAATTTGAAGTCACTTGTTCAAAAGGAGTTGCTACTATTTCTTGGTTTTGATCAAGACTTGGAAAGACTTTCCAGCTTGTTCACTGCAATCAAGGCAACGCTTGAAGATGCTGAGGAGAAACAATTCTCAAACAGAGCTATAAAAGATTGGCTGGAAAAGCTAAAACATGAAGCTCACATCCTGGATGACATCATTGACGAGTGTGCCTATGAAGTATTCGGGTTGGAGAACCAAGGGGTCAAGTGTGGTCCGTCCAACAAGGTACAAGGCTCTTGTTTATCCTCTTTTCATCCCAAGCGTGTTGTTTTCCGTTACAAAATTGCTAAGAAATTAAAAAGAATAAGTGAGAGATTAATGGAAATTGCTGAAGAAAGGAATAAATTTCATTTGGTTGAAATGGTTCGTGAGATAAGAAGTGGAGTCCTTGAGTGGCGCCAAACTACCTCTCTCGTCATTGAACCAAAAGTCTATGGAAGAGAAGAGGATAAAGATAAAATTTTAGACTTTTTGATTGGTGATGCTTCTCATTTTGAGGATTTATTTGTTTATCCAATAACTGGTCTTGGTGGACTTGGAAAAACAACACTTGCCCAATTCATCTTCAATGATGAGAAGGTAGTCAACCACTTTGAGTTAAGAATTTGGGTATGTGTTTCAGAAGATTTTAGTTTGGAGAGAATGACGAAAGCTATTATTGAAGCAACATCTGGGGTTGCCTGCAAGGATTTGGATATAGGATCAAAGCAAAAAAGACTTCAAACTATGCTTCAAAGAAAAAGATATTTGCTGGTTTTAGATGACGTGTGGGATGATAAGCAAGAGAATTGGCAGAGGTTAAAATCCGTATTGGCTTGTGGGGCTAAGGGTGCTTCCATTTTAGTCACTACTCGTCAGTCAAAGGTTGCAGCAATCATGGGAACAATAGCTCCTCATGAATTGTCGGTTCTACCTAACAAATATTGTTGGGAATTGTTTAAGCACCAAGCCTTTGGACCAAATGAAGAAGAACAGGTAGAGCTTGAGGACATAGGGAAGGAGATAGTAAAGAAGTGTCGGGGAATGCCTCTTGCTGCAAAAGCACTAGGAGGTCTTTTACGCTTCAAGAGAAACAAAAATGAGTGGCTCAATGTTAAGGAAAGCAACCTTTTGGAGTTATCACAAAATGAAAACTCCATAATTCCTGTCCTGAGATTAAGTTACATGAACTTACCAATTGAGCACAGACAATGTTTTGCTTATTGCTCAATATTTCCCAAAGATGAAAGCATAGGGAAGCAATATTTGATTGAACTTTGGATGGCTAATGGATTCATTTCATCTGACGAAAGATTAGATGTCGAAGATGTTGGTGATAGAGTGTGGAATGAATTGTATCATAGATCATTTTTTCAGGATATTGAGATAGATGAATTTGGCAAAGTTACAAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCACTATCTATTGCACAAGATGTATGTTGCATTACAGAAGACAATCGTGTAACTAATTTGTCTGGAAGAATTCTCCATCTCTCAGATCATAGGTCCATGCGGAATGTACATGAGGAATCCATTGATGCATTGCAGTTGTATCTAGTCAAATCTTTGAGGACCTATATATTGCCAGATCACTATGGTGACCAACTTTCTCCGCATCCTGATGTTTTGAAATGTCATTCTTTGCGGGTGCTTGATTTTGTAAAAAGAGAAAATTTGTCATCTTCAATTGGTCTTTTAAAACATCTACGATACTTAAATCTTTCTGGGGGTGGCTTTGAAACTCTGCCAGGATCACTGTTTAAATTGTGGAATTTGCAGATATTGAAATTAGATCGTTGCAGACGTCTCAAAATGTTGCCAAACAGTTTGATATGCTTAAAAGCTCTACAACAACTATCTTTTAATGGTTGCCAAGAGTTATCAAGGTTGCCTCCTCAAATAGGGAAGCTGACTTCCCTAAGGATTTTAACCAAGTTCTTTGTTGGCAAAGAAAGAGGGTTCTGTTTGGAAGAATTGGGATCGCAGAAGCTTAAAGGAGATCTTGACATCAAGCATCTAGGAAATGTAAAAAGTGTAATGGATGCCAAAGAAGCCAATATGTCAAGTAAGCAATTGAAGAAGTTGCGATTGTCGTGGGACAGAAATGAAGACTCCGAATTACAGGAAAATGTTGAGGAGATTCTTGAAGTGCTTCAACCTGATACCCAACAACTTTGGAGATTAGAAGTGGAGGAATATAAAGGTTTCCATTTCCCACAATGGATGTCTAGTCAATCTCTCAAATATTTAACTATTTTATATTTGATGGATTGCAAAAATTGTTTAGGACTTCCACTTTTGGGGAAACTACCTTCTCTAAAGACTATAAGAATACAAAACATGATTCATGTAGAATACTTCTATCAGGAGTCCTATGATGGGGAGGTTGTTTTCAGGGCTCTAGAAGATCTTTCACTCCGTCAACTACCAAACCTAAAAATGTTATCAAGGCAGTATGGGGAAAACATGTTTCCACGTTTTTCCATACTTGAAATTGATGGCTGTCCTAAATTTTTGGGAGAGGAAGTTTTGCTGCATCGGTTGCACTCTCTCTCGGTAATTAGTTGTGGCAAGTTCAATTTGTCAGCAGGTTTTAAATGCCTACAGAAATTGTGGATTTCAGAATGCAAAGGGGTGAAAAATTTGCAGGCTTTGCAATATATGACTTCCCTTAAGGAGATAAGATTAAGGAATCTTCATGAGCTAGAATCCTTACCTGACTGCTTTGGCAACCTTTCTTTGCTTCACACATTGAGTATCTTTCACTGTTCCAAGTTGACGTGTCTTCCAATGAGCCTGAGCCTTAGCGGTTTGCAACAATTGACTATTTTTGGTTGCCATTCTGAGTTAGAGAAGCGATGTGAGAAGGAAACTGGAAAGGACTGGCCAAACATTGCTCACATTCGTCATATTTCAGTTGGCAGTACACTTTATGATCATATTTCCGATTGA 3030 0.3835 MAEFVLETLLGNLKSLVQKELLLFLGFDQDLERLSSLFTAIKATLEDAEEKQFSNRAIKDWLEKLKHEAHILDDIIDECAYEVFGLENQGVKCGPSNKVQGSCLSSFHPKRVVFRYKIAKKLKRISERLMEIAEERNKFHLVEMVREIRSGVLEWRQTTSLVIEPKVYGREEDKDKILDFLIGDASHFEDLFVYPITGLGGLGKTTLAQFIFNDEKVVNHFELRIWVCVSEDFSLERMTKAIIEATSGVACKDLDIGSKQKRLQTMLQRKRYLLVLDDVWDDKQENWQRLKSVLACGAKGASILVTTRQSKVAAIMGTIAPHELSVLPNKYCWELFKHQAFGPNEEEQVELEDIGKEIVKKCRGMPLAAKALGGLLRFKRNKNEWLNVKESNLLELSQNENSIIPVLRLSYMNLPIEHRQCFAYCSIFPKDESIGKQYLIELWMANGFISSDERLDVEDVGDRVWNELYHRSFFQDIEIDEFGKVTSFKMHDLVHDLALSIAQDVCCITEDNRVTNLSGRILHLSDHRSMRNVHEESIDALQLYLVKSLRTYILPDHYGDQLSPHPDVLKCHSLRVLDFVKRENLSSSIGLLKHLRYLNLSGGGFETLPGSLFKLWNLQILKLDRCRRLKMLPNSLICLKALQQLSFNGCQELSRLPPQIGKLTSLRILTKFFVGKERGFCLEELGSQKLKGDLDIKHLGNVKSVMDAKEANMSSKQLKKLRLSWDRNEDSELQENVEEILEVLQPDTQQLWRLEVEEYKGFHFPQWMSSQSLKYLTILYLMDCKNCLGLPLLGKLPSLKTIRIQNMIHVEYFYQESYDGEVVFRALEDLSLRQLPNLKMLSRQYGENMFPRFSILEIDGCPKFLGEEVLLHRLHSLSVISCGKFNLSAGFKCLQKLWISECKGVKNLQALQYMTSLKEIRLRNLHELESLPDCFGNLSLLHTLSIFHCSKLTCLPMSLSLSGLQQLTIFGCHSELEKRCEKETGKDWPNIAHIRHISVGSTLYDHISD* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1065 1009 CDD RX-CC_like 2 134 IPR038005 -
Gso15g1065 1009 Gene3D - 327 410 IPR042197 -
Gso15g1065 1009 Gene3D - 6 135 - -
Gso15g1065 1009 PANTHER DISEASE RESISTANCE PROTEIN RP 30 981 IPR044974 GO:0006952
Gso15g1065 1009 PANTHER OS10G0130600 PROTEIN 30 981 - -
Gso15g1065 1009 Pfam NB-ARC domain 171 412 IPR002182 GO:0043531
Gso15g1065 1009 Pfam Rx N-terminal domain 5 87 IPR041118 -
Gso15g1065 1009 Gene3D Ribonuclease Inhibitor 541 861 IPR032675 -
Gso15g1065 1009 Coils Coil 31 51 - -
Gso15g1065 1009 Gene3D Ribonuclease Inhibitor 865 987 IPR032675 -
Gso15g1065 1009 Gene3D - 411 500 IPR036388 -
Gso15g1065 1009 SUPERFAMILY L domain-like 474 992 - -
Gso15g1065 1009 Gene3D - 153 319 IPR027417 -
Gso15g1065 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 425 IPR027417 -
Gso15g1065 1009 PRINTS Disease resistance protein signature 193 208 - -
Gso15g1065 1009 PRINTS Disease resistance protein signature 266 280 - -
Gso15g1065 1009 PRINTS Disease resistance protein signature 362 376 - -
Gso15g1065 1009 PRINTS Disease resistance protein signature 613 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1065 Gso-Chr15 10086374 10090469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1065 566 669 WRKY Transcription Factor Family AT4G12020 30.769 2.93e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1065 - - gmx:100785160 2012.65