Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1063 ATGGAAACCGGCGCCGGTGGCGGTGGCAAAGGACAACAAGGCGGTAAAACCGGAATAGGAATTCCGCAAAAACCGCCAGAGGAACCGAATCTGCGACCAGAATGGCGGCGCCCAACCAGAACCGAGCAGGATGTGGTTCTGCAACCTGAATGGCGGCGACCAAGGCCTAGTGCTCCTCTTTCAGAACCTTCCAATCGTGTCGTCGAAGAGGAGTTGCTATTCCAACCGGAATGGAGACGCTCAAAGCCAAGTGCGAGTGCTATTGCGAATGCCAATGCGAGTGTTTGGGAACCTGAACGGAGGCGATCGAGACCAACGGCAACGGCGTTTCCGTGGAACCAGAATTACGGCGTTCGGAAAGGTATGGCGTCGAGTTCCGGCGGCGGCGGCGGGGTTGAAAGACGCGGAGACCCTAACGACCTTTGGCGACGACCTGCTCCTCCGGCTACAGATTCTGTAGTTCCCAAACTGGAAAAATTACAGATATCGAAACAGTTACCTGCCTCAACTTGTACCCTTGAAAAAAAGGATAAAATTTCACCTATTCAGAGACCTGACAATGGTGGCACGTTAGCAATTCTAACAAGCAGACTTCGTGTCAATCATTTCCCAGTTAAGTTTGATCCAGAGAGTATAATAATGCATTATAGTGTTGGTGTCAAACCTAAGGTTTCTTCAAAATTTGGCCAGCCTCAGAAATTATCAAATTCTGATCTGTCCATGATCAGAGAGAAACTGTTTTCTGATGATCCTGAGAGGTTGCCCTTGGAGATGACTGCACATGATGGTGCAAAAAATATTTATAGTGCTGTACAATTACCAGAAGAGACCTTTACTGTGGAGATCTCTGAAGGAGAGAATGAAAAGGCCATTTCATATAGTGTTACCTTAACTCTTGTTAATAAACTCAGGCTTTGCAAGTTAATGGACTATCTTAGTGGGCATAACCTCTCCATTCCTAGGGACATTTTACAAGGGATGGATGTGGTGGTGAAAGAGAATCCAGCTAGACGTGCTGTTTCTGTAGGACGACACTTCTATCCCACAAATCCTCCTGTCATAATGAAGGATCTTCACCACGGGATAATTGCTATTGGAGGGTTTCAGCATAGTTTGAAGCCTACATCTCAGGGTCTGTCCTTATGTGTAGACTACTCAGTATTGGCTTTTCGAAAGCAAATGTCAGTCTTGGATTTCTTGCATGAGCGTATTGATAACTTTAAATTGGATGAATTCGAAAAATTCAGAAAATTCATTGAGGAGGCACTTATTGGATTGAAAGTTAATGTGACTCATCGTAAATGCAATCGGAAATACATTATTTCAAGATTAACACCTATGATTACTAGGTATGTCACTTTTCCCATTGACAATACTGGTGGATGGAACTCAAATGATGTTAGTCTTATTACCTTTTTTAAAGAAAAATATGGCAAGGATATCGTGTACAAAGATATTCCTTGTCTAGATTTAGGGAAAGACAGGAAGAAGAACTATGTACCCATGGAATTCTGTGTTTTGGTTGAGGGCCAAAGATATCCCAAAGAGCGTCTGGATGGTATTTCTGCGAATACATTGAAAGCAATGTCACTAGCTCACCCAAATGAGAGGGAGTGTGCAATACAAAAGATGGTGCAATCTAGTGATGGACCTTGCAGTGATCTTATTCAAAATTTTGGAATAAGTGTCAACACAACCATGACAACTATTGTAGGACGTGTACTTGGTCCTCCAGAGTTGAAGTTAGGTGATCCAAATGGAAAGATAATCAAATTAACAGTGGATATGGAGAAATGTCACTGGAATCTTGCTGGAAAATCAATGGTGGAAGGTAAACCAGTTGAGTATTGGGGTGTTCTTGATTTCACTAGTTGTGGGCCATATAAGTACAAATTAAGAGGCAAGGAATTCATTCAAAAGCTTATTGGTAAATACAAGAAATTGGGTATATACATGCAGGAGCCCATTTGGTATGAAGAATCTTCAATGAAGATACTTGCGAGTTATGATTTACTATCCGAATTACTTGAAAAAATTAACTACATTTGTAAATATAACCAAGTTCACCCGCAATTTCTTCTCTGTGTAATGGCTAAAAAAAGTCCCGGTTATAAGTACCTAAAGTGGATTTCTGAGACCAAACTTGGTATACTGACACAATGCTGCTTGTCTAATAGTGCTAATGAAGGGGAGGACAAATTTTATACTAATCTGGCTCTCAAGATCAATGCCAAGCTTGGCGGCAGTAACGTGGAGCTCAGTAATGGACTACCTTACTTTGAGGATGAAGGAGATGTTATGTTTTTAGGGGCTGATGTCAACCATCCTGGTTATCAAGACACCAGGAGTCCATCAATTGCAGCTGTGGTTGCTACTGTTAATTGGCCTGCTGCAAATCGTTATGCAGCACGTGTTTTCCCACAATACAATCGAAGTGAGAAAATATTGAACTTTGGGGATGTTTGTCTTGAGCTTGTTGCATGCTATAGGAGGATGAATGGAGTTAGGCCAGAAAGAATTGTTATTTTTCGTGATGGGGTGAGCGAATACCAGTTTGACATGGTTCTTAATGAAGAGCTACTAGATTTGAAGGGAGTATTTCAAAGAGTAAATTACTTTCCAACAATCACTCTTATTGTAACACAAAAACGACATCATACTCGATTTTTTCCAGAGGGCTGGAGAGATGGATCTTCCAGTGGCAATGTTTTGCCGGGAACAGTTGTCGACACAAAAGTTATACACCCTTATGAGTTTGACTTCTACCTTTGTAGTTACTATGGAAACCTAGGTACAAGCAAGCCTACTCATTACCATGTCTTATGGGACGAGCACAAGTTTACATCTGATTTATTGCAGAAGCTAATATACGAGATGTGTTTCACCTTTGCAAAGTGCACTAAACCTGTATCATTAGTCCCTCCTGTGTATTATGCTGACCTTGCTGCTTATAGAGGACGATTATACCATGAAGCAAGGATCAGGATGCAATCTCCAAAGTCAACAGCATTTTCATCTTCTAAAGATGCTTCATCAGCTTCACGAACTGCTTCATTTGAACAGGGATTTTACACATTGCATGCTGACCTGGAAAACATAATGTTCTTCATCTAA 3114 0.4159 METGAGGGGKGQQGGKTGIGIPQKPPEEPNLRPEWRRPTRTEQDVVLQPEWRRPRPSAPLSEPSNRVVEEELLFQPEWRRSKPSASAIANANASVWEPERRRSRPTATAFPWNQNYGVRKGMASSSGGGGGVERRGDPNDLWRRPAPPATDSVVPKLEKLQISKQLPASTCTLEKKDKISPIQRPDNGGTLAILTSRLRVNHFPVKFDPESIIMHYSVGVKPKVSSKFGQPQKLSNSDLSMIREKLFSDDPERLPLEMTAHDGAKNIYSAVQLPEETFTVEISEGENEKAISYSVTLTLVNKLRLCKLMDYLSGHNLSIPRDILQGMDVVVKENPARRAVSVGRHFYPTNPPVIMKDLHHGIIAIGGFQHSLKPTSQGLSLCVDYSVLAFRKQMSVLDFLHERIDNFKLDEFEKFRKFIEEALIGLKVNVTHRKCNRKYIISRLTPMITRYVTFPIDNTGGWNSNDVSLITFFKEKYGKDIVYKDIPCLDLGKDRKKNYVPMEFCVLVEGQRYPKERLDGISANTLKAMSLAHPNERECAIQKMVQSSDGPCSDLIQNFGISVNTTMTTIVGRVLGPPELKLGDPNGKIIKLTVDMEKCHWNLAGKSMVEGKPVEYWGVLDFTSCGPYKYKLRGKEFIQKLIGKYKKLGIYMQEPIWYEESSMKILASYDLLSELLEKINYICKYNQVHPQFLLCVMAKKSPGYKYLKWISETKLGILTQCCLSNSANEGEDKFYTNLALKINAKLGGSNVELSNGLPYFEDEGDVMFLGADVNHPGYQDTRSPSIAAVVATVNWPAANRYAARVFPQYNRSEKILNFGDVCLELVACYRRMNGVRPERIVIFRDGVSEYQFDMVLNEELLDLKGVFQRVNYFPTITLIVTQKRHHTRFFPEGWRDGSSSGNVLPGTVVDTKVIHPYEFDFYLCSYYGNLGTSKPTHYHVLWDEHKFTSDLLQKLIYEMCFTFAKCTKPVSLVPPVYYADLAAYRGRLYHEARIRMQSPKSTAFSSSKDASSASRTASFEQGFYTLHADLENIMFFI* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1063 1037 MobiDBLite consensus disorder prediction 1 67 - -
Gso15g1063 1037 SMART PAZ_2_a_3 394 526 IPR003100 GO:0005515
Gso15g1063 1037 SMART Piwi_a_2 692 990 IPR003165 GO:0003676
Gso15g1063 1037 ProSiteProfiles Piwi domain profile. 692 991 IPR003165 GO:0003676
Gso15g1063 1037 CDD PAZ_argonaute_like 394 508 - -
Gso15g1063 1037 Pfam Piwi domain 693 987 IPR003165 GO:0003676
Gso15g1063 1037 ProSiteProfiles PAZ domain profile. 394 509 IPR003100 GO:0005515
Gso15g1063 1037 Gene3D - 762 1037 IPR036397 GO:0003676
Gso15g1063 1037 Gene3D - 574 754 - -
Gso15g1063 1037 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 73 1036 - -
Gso15g1063 1037 MobiDBLite consensus disorder prediction 111 152 - -
Gso15g1063 1037 SUPERFAMILY PAZ domain 389 547 IPR036085 GO:0005515
Gso15g1063 1037 Pfam Argonaute linker 2 domain 536 581 IPR032472 -
Gso15g1063 1037 Pfam PAZ domain 404 523 IPR003100 GO:0005515
Gso15g1063 1037 Pfam Argonaute linker 1 domain 341 392 IPR014811 -
Gso15g1063 1037 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 73 1036 - -
Gso15g1063 1037 MobiDBLite consensus disorder prediction 29 49 - -
Gso15g1063 1037 SMART DUF1785_2 340 393 IPR014811 -
Gso15g1063 1037 SUPERFAMILY Ribonuclease H-like 685 991 IPR012337 -
Gso15g1063 1037 Gene3D paz domain 388 513 - -
Gso15g1063 1037 Pfam N-terminal domain of argonaute 197 331 IPR032474 -
Gso15g1063 1037 CDD Piwi_ago-like 556 989 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1063 Gso-Chr15 10055109 10061174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1063 198 991 Eukaryotic Initiation Factors Gene Family AT1G48410 36.310 3.44e-147 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1063 K11593 - gmx:100783571 2068.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1063 15 10055109 10061174 Gso15g1063 15 10055109 10061174 ECH