Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1055 ATGGAAGAGTCCTCTCTCTGCTGCGAACAATTGCCGGATGGGGAATGCATTGAGGTTCAGAAAGACGAAGAAGACGATGGACTGATTGAATTGGACTGTCAAAATGGTTTTCCTGAAGGAAGAAAGGAATTTGTTGCACCTGCTGTTGGAATGGAGTTTGAGTCATATGATGATGCTTACAATTATTATATTTGTTATGCCAAGGAGGTGGGGTTTCGCGTGAGGGTGAAGAATTCGTGGTTCAAGCGGAATAGCCGAGAGAAATATGGTGCGGTGCTTTGCTGTAGCAGCCAGGGTTTCAAGAGAATAAAGGACGTTAATCATTTGAGGAAAGAGACGAGAACTGGTTGTCCTGCTATGATAAGGATGAGGTTGGTGGAGTCTCAGAGATGGAGGGTGCTTGAGGTTATGCTTGAACATAACCACATGTTAGGTGCTAAGATACTCAGGTCGGTTAAGAAGATGGGAAATGGAACAAAGAGGAAGCCATTGCCTAGTTCTGATGCTGAGGGTCAGACGATTAAGTTATATCGTGCACTTGTGATTGATGCGGGAGGTAATGGAAATTCAAACTCTTGTGCAAGAGAGGACATAACTTTCTCTGAGTTTTCTAATAAGTGGAACCTTAGAAAAGGTGATACACAGGCCATTTATAATTTCCTCTGCCGGATGCAGTTGACTAATCCAAACTTCTTTTACTTGATGGATTTCAATGATGATGGGCATTTGAGGAATGCATTCTGGGTTGATGCTAGGTCCAGGGCCGCTTGTGGTTACTTTGGCGATGTTATTTATTTTGACAACACAAATTTGTCAAACAAATTTGAAATCCCTCTTGTGACCTTTGTTGGAATAAATCACCATGGTCAATCAGTGTTATTAGGGTGTGGCCTGCTTGCGAGTGAAACAACAGAGTCTTATCTATGGTTGTTAAGGACATGGGTTAAATGTATGTCAGGATGTTCTCCCCAAACTATTATTACTGATAGGTGCAAGGCTTTGCAGAGTGCAATTGTAGAGATTTTTCCTAGATCTCATCATTGTTTTGGCTTGTCATTAATTATGAAAAAAGTACCAGAAAAATTGGGAGGGTTGCACAACTATGATGCAATCAGGAAAGCACTGATTAAAGCAGTTTATGATACATTGAAAGTGATCGAGTTTGAAGCAGCATGGGGATTTATGATTCAATGTTTTGGAGTTAGTGATCATGAGTGGCTTCGTTCTCTATATGAAGATCGAGTTCGTTGGGCTCCAGTATATTTGAAGGGCACATTTTTTGCTGGAATGTCCGCAGCTCGCCCTGGTGAGAGCATTAGCCCTTTCTTTGATAGATATGTGCATAAACAGACTCCTCTGAAGGAGTTTCTTGATAAGTATGAATTAGCTCTTCACAGGAAGCACAAGGAAGAATCTTTTTCAGATATTGAATCAAGGAGCTCAAGCCCATTGCTGAAAACCAGATGTTCCTTTGAATTGCAGCTCTCCAGAATGTACACAAGAGAAATGTTCATGAAATTCCAGTTAGAAGTGGAAGAAGTGTATTCTTGTTTTGGTACAACACAATTGCATGTGGATGGCCCCATCATAATTTTCTTGGTCAAGGAACGTGTTTTGATTGAAGGAAACAGACGGGAGATTAGGGATTTCGAAGTTTTGTACAGTAGAACAGCAGGTGAAGTTCGTTGCATCTGTAGTTGCTTTAATTTTTATGGATATCTATGTCGGCATGCACTGTGTGTTCTCAATTTTAATGGGGTTGAAGAGATACCTCACAAATACATTCTTTCACGATGGAAGAAAGATTTCAAACGTCTTTATGTTCCTGATCACAGCTCTGGTGGTGTTAATGATACTGACCGCATTCAATGGTCTAATCAGTTATTTAGAAGTGCTTTACAAGTTGTAGAGGAGGGGATACTTTCCCTAGACCATTACAATGTAGCGTTACAATCTTTAGAAGAATCACTGAGTAAGGTTCATGATGTAGAACAGAGGCAGGAGACCATCTGGTTGGTCATGACTGATGATGCCATGTGTTCTCCAAACGACAAGGACTTGTCGCTGAGTCCTAATCTAGATATCACGATAGATGATGGTTCTCCAAACAATGAACAACTACTTGAGGTTGAGGATGAGGGCAATGAGCTTGAGAATGAATGTGGGCAATTGTTTGAGATTGATGGAAGTGAACCTGAAAACGGGAGGGATGAAACAACAATAGTTGATAGTCATAGTGGAGAATCTCAAGGGAAAGACTGCCCTCCGCCAGTTGTGAGAATGGAGTTTGATACCTATGATGATGCCTACAACTATTACAATACCTATGCCAAGGATATTGGATTTGCTATTCGGGTTAAATCTTCGTGGACCAAACGCAACAGCAAAGAAAAGCGTGGTGCTGTGCTGTGCTGCAACTGTGAGGGTTTCAAAACAACCAAAGAAGCAAATAGTCATAGGAAAGAAACAAGAACAGGCTGTCTAGCAATGATTAGATTGAGATTAGTGGATTCTAACAGGTGGAGAGTTGATGAAGTCAAGCTTGATCACAACCATTCCTTTGATCCTGAAAGAGCACAAAACTCTAAATCACATAAGAGGATGGACAGTAGGGCCAAAAGAAAAGTTGAGCCAACTTTAGATGTTGAAGTAAGAACAATCAAACTATATCGAATGCCTGTTGTAGATGCATCAGGTTATGGAAGCTCAAATTCTACTGAAGGAGGAACTAGCAACATTAGCTGTTCCAGGCGTTTGAAACTTAAAAAAGGTGATCCAGAACTTATTTCAAATTACTTCTGCCGCATTCAATTGATGAATCCTAACTTTTTCTATGTGATGGATCTGAATGATGATGGACAACTGAGGAATGTATTTTGGATTGATTCTAGATCTAGGGCTGCTTATAGTTATTTTGGTGATGTGGTTGCATTTGACTCAACATGTTTGTCAAACAATTATGAGATTCCACTTGTTGCATTTGTTGGTGTTAATCACCACGGGAAATCTGTTTTGCTAGGATGCGGTCTGCTTGCAGATGAGACATTTGAAACATATATTTGGTTATTTAGGGCATGGCTTACATGTATGACTGGTCGCCCTCCACAAACTATTATCACAAACCAGTGTAAGGCCATGCAAAGTGCAATTGCAGAGGTTTTCCCGAGAGCTCACCATAGAATTTGTCTATCACAAATCATGCAGAGCATTCTTGGGTGTTTTGTGCAGTTTCAGGAGTATGAAGCATTTCAGATGGCACTGACTAAAGTGATATATGACTCTAAAACAGTAGATGAATTTGAAAGGGCTTGGGATGATTTAACCCAGCATTTTGGAATAAGAAATCACGAAAAGCTCCAAACCTTACATGAGGAACGAGAGCATTGGGCTCCAGTGTACTCCAAAGACACATTTTTTGCTGGAATATCTGATTATGAAAAGGGTGAGTCCGTGATTCCCTTTTTTAAGGGTCATGTGCATCAACAAACTTCTTTGAAAGAATTTTTTGAGATTTATGAATTAGTCCAGCAAAAAAAGCATAAAACTGAAGTTCTTGATGATTTTGAGTCGCGCGATTTGAGCTCATTACTGAAGACAAGGTGCTACTATGAGTTGCAACTCTCTAAACTGTACACAAATGCAGTATTCAGGAAGTTCCAAGATGAGGTGGTAATGATGTCCTCTTGTTTCAGCATCACACAGACTCAAACAAGTGGGTCCATAGTGACATACATGGTAAAAGAACGCGAAGGGGAAGAGCCTGCAAGAGATGCTAGGAATTTTGAAGTCATGTACGATAATGCCGGAGCAGAAGTACGCTGCATTTGTAGTTGCTTTAACTTCAAAGGTTACCTGTGCAGACATGCCTTGTATATCCTTAATTACAATTGTGTGGAGGAAATTCCATGTCAATACATTTTGTCAAGATGGAGGAGGGATTTTAAGCGTTTGTATGTACCTCATCTCAGTGCTGACAATGTTGATATTAGCAACCCGGTTCAGTGTTTTGATCATTTGTACAAACGTGCCATGCAAGTTGTTGAAGAAGGGATGATATCCCAAGATCATTATATGCTTTCTTGGCAAACATTTAAAGAGTCTTTGAATAAGATTCGCCTTGTAGCAGACAAGATTGAATAA 4140 0.4024 MEESSLCCEQLPDGECIEVQKDEEDDGLIELDCQNGFPEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHLRKETRTGCPAMIRMRLVESQRWRVLEVMLEHNHMLGAKILRSVKKMGNGTKRKPLPSSDAEGQTIKLYRALVIDAGGNGNSNSCAREDITFSEFSNKWNLRKGDTQAIYNFLCRMQLTNPNFFYLMDFNDDGHLRNAFWVDARSRAACGYFGDVIYFDNTNLSNKFEIPLVTFVGINHHGQSVLLGCGLLASETTESYLWLLRTWVKCMSGCSPQTIITDRCKALQSAIVEIFPRSHHCFGLSLIMKKVPEKLGGLHNYDAIRKALIKAVYDTLKVIEFEAAWGFMIQCFGVSDHEWLRSLYEDRVRWAPVYLKGTFFAGMSAARPGESISPFFDRYVHKQTPLKEFLDKYELALHRKHKEESFSDIESRSSSPLLKTRCSFELQLSRMYTREMFMKFQLEVEEVYSCFGTTQLHVDGPIIIFLVKERVLIEGNRREIRDFEVLYSRTAGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPHKYILSRWKKDFKRLYVPDHSSGGVNDTDRIQWSNQLFRSALQVVEEGILSLDHYNVALQSLEESLSKVHDVEQRQETIWLVMTDDAMCSPNDKDLSLSPNLDITIDDGSPNNEQLLEVEDEGNELENECGQLFEIDGSEPENGRDETTIVDSHSGESQGKDCPPPVVRMEFDTYDDAYNYYNTYAKDIGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTTKEANSHRKETRTGCLAMIRLRLVDSNRWRVDEVKLDHNHSFDPERAQNSKSHKRMDSRAKRKVEPTLDVEVRTIKLYRMPVVDASGYGSSNSTEGGTSNISCSRRLKLKKGDPELISNYFCRIQLMNPNFFYVMDLNDDGQLRNVFWIDSRSRAAYSYFGDVVAFDSTCLSNNYEIPLVAFVGVNHHGKSVLLGCGLLADETFETYIWLFRAWLTCMTGRPPQTIITNQCKAMQSAIAEVFPRAHHRICLSQIMQSILGCFVQFQEYEAFQMALTKVIYDSKTVDEFERAWDDLTQHFGIRNHEKLQTLHEEREHWAPVYSKDTFFAGISDYEKGESVIPFFKGHVHQQTSLKEFFEIYELVQQKKHKTEVLDDFESRDLSSLLKTRCYYELQLSKLYTNAVFRKFQDEVVMMSSCFSITQTQTSGSIVTYMVKEREGEEPARDARNFEVMYDNAGAEVRCICSCFNFKGYLCRHALYILNYNCVEEIPCQYILSRWRRDFKRLYVPHLSADNVDISNPVQCFDHLYKRAMQVVEEGMISQDHYMLSWQTFKESLNKIRLVADKIE* 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1055 1379 MobiDBLite consensus disorder prediction 727 755 - -
Gso15g1055 1379 SMART 26again6 561 588 IPR006564 GO:0008270
Gso15g1055 1379 SMART 26again6 1272 1299 IPR006564 GO:0008270
Gso15g1055 1379 Pfam MULE transposase domain 263 357 IPR018289 -
Gso15g1055 1379 Pfam MULE transposase domain 975 1068 IPR018289 -
Gso15g1055 1379 Pfam SWIM zinc finger 540 582 IPR007527 GO:0008270
Gso15g1055 1379 Pfam SWIM zinc finger 1271 1290 IPR007527 GO:0008270
Gso15g1055 1379 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Gso15g1055 1379 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 661 IPR031052 GO:0006355
Gso15g1055 1379 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 702 1376 IPR031052 GO:0006355
Gso15g1055 1379 ProSiteProfiles Zinc finger SWIM-type profile. 1261 1297 IPR007527 GO:0008270
Gso15g1055 1379 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 21 661 - -
Gso15g1055 1379 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 702 1376 - -
Gso15g1055 1379 MobiDBLite consensus disorder prediction 852 875 - -
Gso15g1055 1379 Pfam FAR1 DNA-binding domain 61 144 IPR004330 -
Gso15g1055 1379 Pfam FAR1 DNA-binding domain 771 855 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1055 Gso-Chr15 9955449 9964110 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso15g1055 MULE 2.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1055 K17604 - gmx:100796448 2788.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1055 15 9955449 9964110 Gso9g0170 9 1486775 1489475 GST