Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1052 ATGGCTAACGAAATCCCTCACGATGAGGTAGTGTGCGTTACCGGCGCCAACGGTTTCATCGGTTCGTGGCTGGTCCGAACCCTCTTGGAGAAGGAGAACCCACGCTACACCATCCACGCCACCATCTTCCCCGGCTCCGACGCCTCCCACCTCTTCAACCTCCACCCCTCCGCCGCCAGCCGCCTCACCCTCTTCCCCGCCGACCTCCTCGACGCCGCCGCCCTCTCCCGCGCCATCACCGCCTGCTCCGGCGTCTTCCACGTGGCCTCCCCCTGCACCCTCGAGGACCCCACAGACCCCCAAAGAGACCTTCTCGAACCCGCGGTTCAGGGCACCCTGAACGTCCTAACCGCCGCAAGGCGCGTGGGCGTGCGGCGCGTGGTGCTCACCTCCTCGATCTCCGCGATGGTGCCGAACCCGGGGTGGCCGGCGGGGCGGGCCGCGGACGAGGCGTCGTGGACGGACGTGGAGTACTGTAAGGGAAGGGGGAAGTGGTACCCGGTGGCGAAGACGGAGGCGGAGAGGGCGGCGTGGGCGTTCGACGGCGTGGAAGTTGTGGCGGTTCTCCCGGCGACGTGTTTAGGGCCGCTTCTGCAGCCGGATCTCAACGCGAGCTCCGCCGTGCTGCGGGAGCTGATGATGGGGTCGAGGGAGACGCAGGAGTATCACTGGTTGGGTGCGGTGCATGTGAAGGACGTTGCTAAAGCTAATGTTTTGTTATATGAAACCCCCACTGCTGCTGGTAGATACCTCTGCACCAATGGTATCTACCAGTTTTCTAGTTTTGCTGCCATGGTCTCTGAATTGTACCCCGAATTCCCTATTCACAGGTTCCCAGAAGAAACGCAACCTGGCCTGACAGCATGTAAAGATGCAGCAAAGAGACTAATGGACTTGGGTCTTGTCCTCACACCAATTCAAGATGCTGTGAGAGAAGCAGTGGAGAGCCTCATAGCTAAAGGCTTCCTGCAATGCACACCCTCACAGAGTTAG 993 0.6123 MANEIPHDEVVCVTGANGFIGSWLVRTLLEKENPRYTIHATIFPGSDASHLFNLHPSAASRLTLFPADLLDAAALSRAITACSGVFHVASPCTLEDPTDPQRDLLEPAVQGTLNVLTAARRVGVRRVVLTSSISAMVPNPGWPAGRAADEASWTDVEYCKGRGKWYPVAKTEAERAAWAFDGVEVVAVLPATCLGPLLQPDLNASSAVLRELMMGSRETQEYHWLGAVHVKDVAKANVLLYETPTAAGRYLCTNGIYQFSSFAAMVSELYPEFPIHRFPEETQPGLTACKDAAKRLMDLGLVLTPIQDAVREAVESLIAKGFLQCTPSQS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1052 330 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 313 - -
Gso15g1052 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 316 IPR036291 -
Gso15g1052 330 CDD FR_SDR_e 11 301 - -
Gso15g1052 330 Pfam NAD dependent epimerase/dehydratase family 11 246 IPR001509 -
Gso15g1052 330 Gene3D - 3 330 - -
Gso15g1052 330 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1052 Gso-Chr15 9937992 9941008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1052 9 323 Monolignol Biosynthesis Gene Families AT2G02400 64.465 4.96e-159 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1052 - - gmx:100795399 644.039