Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1050 ATGAGTAGCGTGTCCTTCTTTAAGTTGATCATGGGTGAAAGAATTCTAGTATTGCTACTACTCTTTTTCACTCATTTGTTGATTGTATTAGCAAAGACATCACCTCAGGATTCTGCTGCTATGCTGGCACTAGTGAATGAATGGCAGAACACACCGCCTAATTGGGTGGGTTCAGATCCTTGTGGTGCAGGTTGGGATGGCATTGAGTGTACCAATTCACGCATTACCTCCATATCATTAGCAAGCACGGATTTATCTGGCCAGCTTACTTCAGATATTGGATCACTATCTGAACTGCTGATTTTGGATCTGTCTTACAATAAGAAATTAACTGGACCACTTCCCAGTAACATTGGAAACTTGAGAAAACTGAGAAACTTACTTCTTATTAATTGTGGCTTCACTGGTCCTATCCCAGTTACAATTGGAAATTTAGAACGGCTTGTTTTCCTATCTTTAAATTCTAATGGCTTCACTGGGACAATTCCAGCTGCCATTGGTAATCTCTCAAATGTTTATTGGCTAGACTTAGCTGAAAATCAGCTTGAAGGGTCCATCCCCATATCTAATGGAACTACTCCTGGTCTTGATATGATGCACCATACAAAGCACTTTTCCATTTTCCACAGTCATTTTGGGAAGAATAAGCTTTCAGGAAACATTCCTTCTCAACTTTTTAGCCCGGAAATGTCTCTCATACATGTGCTTTTTGAATCCAACCGATTTACTGGCGGCATTCCATCTACACTTGGCCTTGTCAAGACTCTGGAGGTGGTGCGTTTTGATAAAAACTTTTTAAGTGAACCTTTGCCTCTGAACATCAACAATCTCACAAGTGTTAGGGAATTGTTCCTGTCCAACAACCGCCTGTCTGGTTCCCTCCCAAACCTTACTGGAATGAATTCCCTCAGTTACCTAGATATGAGCAATAATAGTTTTGATCAATCAGACTTTCCACCGTGGTTGCCAACTCTTCCAGCTCTGACAACAATAATGATGGAGGATACAAAACTTCAAGGACGTATTCCTGTTTCTTTGTTCAGCCTGCAACAGTTGCAGACAGTGGTGCTGAAAAAGAACCAGCTAAATGGCACTTTAGATATTGGCACCTCCATCAGCAACCAACTGGACCTCCTAGATTTGCAGATTAATTCCATTGAAGATTTTGATCCGCAAATTGATGTCTCTAAAGTGGAGATAATACTTGTGAATAATCCATATTGCCAAGAGTCAGGAGTTCCACAGCCTTATTGCACCATTACAAAATCCAATGACTCGTATTCAACACCACCAGATAACTGTGTGCCTGTTCCCTGCAGCTTAGATCAGACATTAAGCCCCAAGTGCAAATGTGCATACCCATATACAGGAACCTTATTTCTCAGAGCTCCTTCCTTCTCTGACTTGGAAAACGAGACAGTCTTTGTAACTCTGGAGTATTCTCTGATGGAATCTTTTCAACTTCATATGAAACCTGTGAATTCAGTTTCTTTAAGCAATCCAAGGAAGAACATATATCAGTACCTTGAACTGACTTTAAAAATATTTCCATTTGGCCAAGGTCGTTTCAATCGAACAGGGGTTTCTGGTATAGGCTTTCTTCTCAGCAACCAAACATACAAACCTCCTGCAATGTTTGGACCTTATTATTTTATCGCTGATGAGTATGAACACTATGTGGATAATTCAGTATTAGAAGGTCTTGTGCCATCCAGTAGTAAATCTTCAAATACGGGCATCATAGCTGGAGCTGCTGGTGGTGGTGCTGCACTGTTGGTGTTAGTAGTCCTTGCATGTGTGTATGCTATCAGCCGGAAGAAAAAGTCAAAAAAATCAACTGGGAATAGCAATCCTTTTGAACAATGGGATCCGCATGACAGCAATAGTAGCATCCCTCAGTTGAAAGGAGCAAGGCGCTTCAGCTTTGAAGAGATACAGAACTGCACCAAAAACTTTTCACAAGTCAATAATATAGGATCTGGCGGTTATGGGAAGGTTTATCGGGGAACTCTTCCCAACGGGCAACTAATTGCAGTAAAGCGAGCTCAAAAGGAATCTATGCAGGGAGGGTTGGAGTTCAAAACTGAGATTGAACTACTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTGGTCGGTTTCTGCTTTGAGCAAGGAGAACAAATGCTGATATATGAGTATGTTGCAAATGGTACTTTGAAGGATACTCTTTCAGGGAAGTCTGGAATTAGATTGGATTGGATTAGAAGGCTAAAAATAGCCCTTGGTGCTGCGAGGGGGCTGGATTATCTGCATGAACTTGCCAATCCTCCAATCATACACAGGGACATCAAATCCACTAACATTTTACTGGATGAGCGCTTGAATGCTAAAGTATCTGATTTTGGTCTGTCCAAGCCTTTGGGCGAAGGTGCAAAAGGTTATATTACCACACAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGGTAACTGCAAGAAGGCCAATAGAACGAGGGAAATATATTGTGAAAGTGGTTAAGGATGCTATCGACAAGACGAAAGGCTTCTATGGTCTTGAGGAAATTCTTGATCCAACTATTGAACTGGGGACAGCACTGAGCGGTTTTGAGAAGTTCGTGGACCTTGCAATGCAGTGTGTTGAAGAGTCAAGTTCTGACAGACCTACAATGAATTATGTGGTGAAAGAAATTGAAAACATGTTGCAGTTGGCTGGTTCAAGCCCCATTTTATCAGCATCAGCATCCACTTCATCTAGTTATAATAATGCAACTAAGGGGAGTTCCCTGCATCCTTACAATAATGAATACTTTGATTGA 2889 0.4126 MSSVSFFKLIMGERILVLLLLFFTHLLIVLAKTSPQDSAAMLALVNEWQNTPPNWVGSDPCGAGWDGIECTNSRITSISLASTDLSGQLTSDIGSLSELLILDLSYNKKLTGPLPSNIGNLRKLRNLLLINCGFTGPIPVTIGNLERLVFLSLNSNGFTGTIPAAIGNLSNVYWLDLAENQLEGSIPISNGTTPGLDMMHHTKHFSIFHSHFGKNKLSGNIPSQLFSPEMSLIHVLFESNRFTGGIPSTLGLVKTLEVVRFDKNFLSEPLPLNINNLTSVRELFLSNNRLSGSLPNLTGMNSLSYLDMSNNSFDQSDFPPWLPTLPALTTIMMEDTKLQGRIPVSLFSLQQLQTVVLKKNQLNGTLDIGTSISNQLDLLDLQINSIEDFDPQIDVSKVEIILVNNPYCQESGVPQPYCTITKSNDSYSTPPDNCVPVPCSLDQTLSPKCKCAYPYTGTLFLRAPSFSDLENETVFVTLEYSLMESFQLHMKPVNSVSLSNPRKNIYQYLELTLKIFPFGQGRFNRTGVSGIGFLLSNQTYKPPAMFGPYYFIADEYEHYVDNSVLEGLVPSSSKSSNTGIIAGAAGGGAALLVLVVLACVYAISRKKKSKKSTGNSNPFEQWDPHDSNSSIPQLKGARRFSFEEIQNCTKNFSQVNNIGSGGYGKVYRGTLPNGQLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLVGFCFEQGEQMLIYEYVANGTLKDTLSGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDIKSTNILLDERLNAKVSDFGLSKPLGEGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIERGKYIVKVVKDAIDKTKGFYGLEEILDPTIELGTALSGFEKFVDLAMQCVEESSSDRPTMNYVVKEIENMLQLAGSSPILSASASTSSSYNNATKGSSLHPYNNEYFD* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1050 962 MobiDBLite consensus disorder prediction 614 629 - -
Gso15g1050 962 Gene3D Transferase(Phosphotransferase) domain 1 728 934 - -
Gso15g1050 962 Gene3D Ribonuclease Inhibitor 32 202 IPR032675 -
Gso15g1050 962 SMART serkin_6 652 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1050 962 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Gso15g1050 962 Pfam Protein kinase domain 653 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1050 962 PANTHER - 16 949 - -
Gso15g1050 962 ProSiteProfiles Protein kinase domain profile. 652 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1050 962 SUPERFAMILY L domain-like 42 366 - -
Gso15g1050 962 SUPERFAMILY Protein kinase-like (PK-like) 638 945 IPR011009 -
Gso15g1050 962 CDD STKc_IRAK 658 924 - -
Gso15g1050 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
Gso15g1050 962 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 949 - -
Gso15g1050 962 Gene3D Phosphorylase Kinase; domain 1 623 727 - -
Gso15g1050 962 Gene3D Ribonuclease Inhibitor 203 406 IPR032675 -
Gso15g1050 962 MobiDBLite consensus disorder prediction 609 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1050 Gso-Chr15 9924898 9932043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1050 17 961 Receptor kinase-like Gene Family AT5G49760 57.278 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gso15g1050 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1050 - - gmx:100780344 1816.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1050 15 9924898 9932043 Gso9g0165 9 1453192 1460556 GST
Gso7g2295 7 46533576 46540313 Gso15g1050 15 9924898 9932043 PCT