Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1036 ATGTATCATTCAAAGAATGTTCCTAGTGCAAGTTTAATTGGTGGTAATTCATTAAGTCATGGTCAGCACATAGATTGTGGTGGCAGCACAATGGATCCTGGCAGTGGAGGAAATGGTCTTAGCAACAACTCTAATCTCACCTCAAAACAACGTTTACGGTGGACACATGAATTGCATGAGCGCTTTGTTGATGCTGTGGCTCAACTTGGTGGGCCAGATCGTGCCACACCCAAAGGCGTGCTCAGAGTTATGGGTGTACAAGGCTTGACCATTTACCATGTCAAAAGTCATTTACAGAAATACCGACTTGCAAAATATTTACCTGACTCCTCATCTGATGAAGGGAAAAAGGCCGACAAGAAAGAAACAGGGGATATGCTTTCCAATCTTGATGGTTCATCTGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTTCAGAAGCGACTACATGAACAATTGGAGGTGCAAAGACAGCTACAATTACGGATAGAAGCCCAGGGTAAATACCTGAAAAAGATAATTGAAGAACAACAGCGACTCAGTGGTGTTCTTTCGGAGGCACCTGGTTCTGGTGCTGTAGCGGTGGTTCCAGGGGATGCGTGCCAAGAACCTGATAATAAGACTGACCCGTCAACCCCTGACCCTGAAAAGGCTGCCAAAGACCGTGCTCCAGCGAAGAGTCTTTCAATAGAATCTTTTTCATCTCACCCTGAACCAATGACACCAGATTCTGGCTGTCATGTTGGTTCCCCTGCTGAAAGCCCTAAAGGGGAGAGATCGGCCAAGAAGCAACGAGTAACCATGGATGGTGTGTATTCTAAACCAGAAATGGTGCTTCCACATCAGATACTGGAGTCAAGCATGTCATCATACCAGCAACCTAACACTGTTTTTCTTGGCCAAGAGCAATTTGATCCTTCTTTGGATATATCTACCAAAAGTGATGAGGAATTGGTTAAGATTGGTGGCGGTAATCTGTGA 990 0.4495 MYHSKNVPSASLIGGNSLSHGQHIDCGGSTMDPGSGGNGLSNNSNLTSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKETGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPGSGAVAVVPGDACQEPDNKTDPSTPDPEKAAKDRAPAKSLSIESFSSHPEPMTPDSGCHVGSPAESPKGERSAKKQRVTMDGVYSKPEMVLPHQILESSMSSYQQPNTVFLGQEQFDPSLDISTKSDEELVKIGGGNL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1036 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 106 IPR017930 -
Gso15g1036 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 320 IPR044848 GO:0003700
Gso15g1036 329 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Gso15g1036 329 MobiDBLite consensus disorder prediction 212 227 - -
Gso15g1036 329 Coils Coil 139 159 - -
Gso15g1036 329 MobiDBLite consensus disorder prediction 108 132 - -
Gso15g1036 329 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Gso15g1036 329 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Gso15g1036 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 320 - -
Gso15g1036 329 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Gso15g1036 329 MobiDBLite consensus disorder prediction 23 45 - -
Gso15g1036 329 MobiDBLite consensus disorder prediction 108 126 - -
Gso15g1036 329 Gene3D - 48 107 - -
Gso15g1036 329 MobiDBLite consensus disorder prediction 187 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1036 Gso-Chr15 9789977 9797674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1036 84 329 G2-like Transcription Factor Family AT2G01060 62.891 9.51e-90 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso15g1036 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1036 - - gmx:100786925 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1036 15 9789977 9797674 Gso9g0151 9 1337259 1344812 GST