Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1035 ATGTACTCGAGGCTCATACACCCCCACGATGGGATTGTGACGCAGGATGACTTGCAGGGTGCTGCTTCCAATCTCTCTCACGCTCACAAGGGAGATCCTTGTCTCGTTCTGACGGCTGATCCCAAGCCTCGTCTTCGTTGGACTCAGGACTTGCATGAACGGTTCGTTGATGCGGTAACGCAGCTTGGGGGAGCAAGTAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTGTTTCATTTGAAGAGTCATCTTCAGAAATACAGGCTTGGTAAGCAATCTGGGAAGGATGTGGGTGAAGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTGGCGCTGATAACTCATCTCCAAAGTTGCCAACTTCAGATACAAATGAGGGTTATGAAATCAAGGAGGCATTGAGAGCACAGATGGAAGTGCAAAGTAAATTACATTTGCAAGTGGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCAGAAAGGAGATACATGGCCATGCTCGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATTGGTGCCACAGTCATAGACACAGACAGCCAAAAGTTTCAAGGAATTGGAAGCAAAGCACCTAGAGGTACCTTGGTTGATCCTCTTGGTTTTTACTCCATGCCATCCACTGAGGTGGCTGGAGTGAATGTCCCAGAAGAAGAAATACCGCTGAGTCTCCCACCCCAAAGGGCTGATTGTTCAACCGAAAGTTGTTTAACCTCACATGAGAGTTCTGGAGGATTGGCTTTAGAAGGATCTCCTGGCGAGGGAAAAAGGAGGATGCTTGGCATGGACTCGATGGCAGCACCTTTGATATGGAGTGAAGCTAAGATGAGAACTCAAGCCATCAATGTAGCCCAAGGTAATCTTCCTCAAGGAATAACTAGGTATGGCATGTAG 942 0.4735 MYSRLIHPHDGIVTQDDLQGAASNLSHAHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDVGEGCKDGSYLLESPGADNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDSQKFQGIGSKAPRGTLVDPLGFYSMPSTEVAGVNVPEEEIPLSLPPQRADCSTESCLTSHESSGGLALEGSPGEGKRRMLGMDSMAAPLIWSEAKMRTQAINVAQGNLPQGITRYGM* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1035 313 MobiDBLite consensus disorder prediction 117 131 - -
Gso15g1035 313 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Gso15g1035 313 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Gso15g1035 313 MobiDBLite consensus disorder prediction 250 275 - -
Gso15g1035 313 MobiDBLite consensus disorder prediction 100 132 - -
Gso15g1035 313 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Gso15g1035 313 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 313 - -
Gso15g1035 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Gso15g1035 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Gso15g1035 313 Gene3D - 41 99 - -
Gso15g1035 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 313 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1035 Gso-Chr15 9784227 9787645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1035 31 255 G2-like Transcription Factor Family AT3G24120 48.319 3.74e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso15g1035 Myb_DNA-binding 5.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1035 - - gmx:100786397 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1035 15 9784227 9787645 Gso9g0150 9 1327343 1334134 GST