Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1022 ATGGACTCGAAAACTAGTTCTAGAGCTCTCCCAAAACACCATCAGAAGACGGCTGGGATTCAAACCCTTGAGGCAAAAGACACAGGGTCTTCTTTGCAGAAGGGGGAGAAAACAGAGCTGGCTGCTCCTGTGGATTTGTCTATGTATGCAGCGAACGCATCCAAGCAGAATACCGGGGAAACTGCTGAAATCAAGAAGTTAGGAGGTTTAACCCTAAAGGGGTCTGCTGATTCCATGAGCATTAAAAGTGGTTCTGGTGCTTCCTCATCTGTTCTCGACAAAGTAGTTCATGCTGCTAATGAGAACATAGTCTCACAGGAAAGCTCTATTGATCTAGACAAAAAGACGTCGGAAGATGGAAGTGTGAAGAACAGTTCTGTTTCTGCCAAAGTTAGTGATGGGGCCAGCAGTCTTGCAAAGACAAGTGGAAGTGCCAAGATCAGCAACCGGGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGCACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCATAAACAAACCTCACAAGGCTAATGACTTGAGATGGGAAGCTATCCAAGCAGTTCGAAGTAGAGATGGGGTGTTGGGTTTAGGTCACTTTAGATTACTGAAGAGGCTGGGTTGTGGGGATATTGGCAGCGTTTACCTCTCCGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTAATGGACAAAGGGTCCCTTGCAAGTCGTAAAAAGCTACTTCGTGCTCAGACAGAACGAGAAATTCTGCAGTCTCTAGATCACCCTTTTCTCCCAACTTTGTACACCCATTTTGAGACAGAGAAGTTCTCATGCTTGGTTATGGAATTCTGCCCAGGTGGTGACCTCCATACTCTTAGGCAGAAGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTAAAATTTTATGTGGCAGAGGTCCTACTGGCTTTGGAGTATCTTCACATGCTTGGGATTGTCTACCGTGACCTTAAGCCAGAAAATGTTCTTGTTAGGGATGATGGACATATTATGCTCTCTGACTTTGACCTCTCCCTCCGATGTGCTGTTAGTCCGACCCTCGTTAAAACCTCGTCCACAGATTCTGAGCCTTTAAGAAAGAATGCTGTTTACTGTGTCCAACCTGCATGTATTGAGCCACCTTCCTGCATCCAACCATCCTGTGTTGCTCCTACTACATGCTTTTCACCCCGGCTTTTCTCTAGCAAATCAAAGAAAGACAGGAAGCCAAAAAATGAAATCGGCAACCAAGTGAGTCCGTTACCTGAGCTCATTGCAGAGCCTACCGATGCCCGGTCCATGTCATTTGTTGGAACTCACGAATACTTGGCACCGGAGATCATTAAGGGTGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGGATCTTTCTATATGAGCTGTTGTTCGGTAAAACGCCTTTCAAGGGATCCGGTAACCGAGCTACATTGTTTAACGTTGTCGGTCAGCCACTGCGGTTTCCAGAAGCACCCGTTGTGAGTTTTGCGGCAAGGGATCTTATAAGGGGGTTGCTTGTAAAGGAACCTCAGCACAGATTGGCATATAAAAGAGGCGCTACTGAGATCAAGCAACACCCCTTTTTTGAAGGTGTGAATTGGGCATTGATCAGATGTGCTACCCCACCCGAGATCCCCAAGGCTGTAGAGTTTGAGAAGATACCCTCACCAGCTTCATCAAGTGGTGGTGAAAAGGCTGTTAACCATATGTCAATAGCTAATCAGAAAGGTTCTGATAATTATCTGGAGTTTGATTTCTTCTAG 1827 0.4587 MDSKTSSRALPKHHQKTAGIQTLEAKDTGSSLQKGEKTELAAPVDLSMYAANASKQNTGETAEIKKLGGLTLKGSADSMSIKSGSGASSSVLDKVVHAANENIVSQESSIDLDKKTSEDGSVKNSSVSAKVSDGASSLAKTSGSAKISNRADFVESGKSSICRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQAVRSRDGVLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSTDSEPLRKNAVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPASSSGGEKAVNHMSIANQKGSDNYLEFDFF* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1022 608 ProSiteProfiles Protein kinase domain profile. 212 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1022 608 MobiDBLite consensus disorder prediction 416 435 - -
Gso15g1022 608 SUPERFAMILY Protein kinase-like (PK-like) 187 570 IPR011009 -
Gso15g1022 608 SMART serkin_6 212 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1022 608 CDD STKc_phototropin_like 211 568 - -
Gso15g1022 608 Gene3D Transferase(Phosphotransferase) domain 1 296 371 - -
Gso15g1022 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Gso15g1022 608 Gene3D Phosphorylase Kinase; domain 1 210 295 - -
Gso15g1022 608 Gene3D Transferase(Phosphotransferase) domain 1 444 568 - -
Gso15g1022 608 Pfam Protein kinase domain 213 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1022 608 Pfam Protein kinase domain 447 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1022 608 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 608 - -
Gso15g1022 608 PANTHER FLIPPASE KINASE 1-RELATED 3 608 - -
Gso15g1022 608 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1022 Gso-Chr15 9587132 9591663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1022 37 608 AGC Kinase Gene Family AT5G47750 77.700 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso15g1022 Pkinase 1.6e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1022 15 9587132 9591663 Gso9g0132 9 1148131 1152187 GST