Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1021 ATGATGTCAGTGGAAACGGGGCATGATTGTTTGCACTATGATTCCGATGAAGAAACCTCTAGTTGCTCTTGCGGTTTCATTGGATTTCGGAGAAACCAAGTGTTTGATTGCAGCACCAACGAGATAAACAATGAAGATTCAGAGGAGCTATTTGAGATCAATCTGAAGGAGCAATTGGATACAATATCAGAAGAAGACTGCGAAAGCAGTGTGTTCTCTTTTGATTTTCATAACGACAAAGATGTTGTTCATGTTGCAGTGGACCACGTTGGGGAATCAAGCATGGAAGCACTTTTATGGACTTTGAATCATGCTGTCACACCCTCTACCACTGTCTATCTCGTACACGTTTTCCCTGAAATCAGGCTCGTCCCAAGTCCATTTGGGAAATTTCCAAGGAGTCATGTAAATCCAGAATATGTTAACTTTCACTTGACACAACAGAAAAGCAAGACAAAAGTGCTCCTTCAAAAGTTCATTGACTTGTGCCTTGATTCAAAGGTTAAGGTGGAGATTATGCTTATTGAGGGTGACAACATTGCCAAAGCTATAACAGACCATGTTAGAGTTCATAGTATAAGGAAATTGGTGATTGGAATTACCAAATCTAATTTAAGCAAATCTGTCTCTAGAAGGCGAAATGCCATAGCAAACAAGGTCCTCAAGAACGTACCAGAAATTTGTGATATTAAAATAATATGCGATGGAAAAGAAGTGATTGATCAGATGATAGGTTGCAACTCATCATATTCCAGTGACAGTAGAAGTTCCAGAGTTTCACAAGAAGAAAATGAATCCTGTGGTTTTGTTCCTCTTATGCGTTTTGTGCCAAATCCTATATGGTTATTTAGACCAAGATTTTGA 864 0.3889 MMSVETGHDCLHYDSDEETSSCSCGFIGFRRNQVFDCSTNEINNEDSEELFEINLKEQLDTISEEDCESSVFSFDFHNDKDVVHVAVDHVGESSMEALLWTLNHAVTPSTTVYLVHVFPEIRLVPSPFGKFPRSHVNPEYVNFHLTQQKSKTKVLLQKFIDLCLDSKVKVEIMLIEGDNIAKAITDHVRVHSIRKLVIGITKSNLSKSVSRRRNAIANKVLKNVPEICDIKIICDGKEVIDQMIGCNSSYSSDSRSSRVSQEENESCGFVPLMRFVPNPIWLFRPRF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1021 287 Gene3D HUPs 77 209 IPR014729 -
Gso15g1021 287 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 8 284 - -
Gso15g1021 287 Pfam Universal stress protein family 83 224 IPR006016 -
Gso15g1021 287 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 8 284 - -
Gso15g1021 287 CDD STK_N 91 236 - -
Gso15g1021 287 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 90 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1021 Gso-Chr15 9582465 9584589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1021 83 236 U-box Gene Family AT2G45910 27.848 7.24e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1021 - - gmx:100818837 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1021 15 9582465 9584589 Gso9g0131 9 1139252 1140801 GST
Gso17g0039 17 468945 470627 Gso15g1021 15 9582465 9584589 PCT