Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1020 ATGTCTTTGTCTGTGGAAGACAACTACTATGGCAGAAGCAGCAGTGTGAGTGAGATAGAGGAAGAGAATTCTTCACACTTGCACTTAAATGATGATGGTCCTAATCCTATGGTTACCATTGGTGAAGAAGAGAACGAGGATGAAGACACTGTTTATGTGGCTGTTGGTAAGAGCCAGAGTAGCATGGAAGCCTTGGCATGGACCCTCAACAACTTGGCCACTCCTTCTACCATGCTCTATCTCATACACATTTTCCCTGAGATCAAACTCCTTCCAAATCCATTGGGAGTGGGAATGATTCCAAAGGACCAAGTGAGTCCTGAGCAGGTAGAGAGCTACATGGCTCAAGAAAGAGGCAAGAGGAGAGAGCTTCTAAACAAATTCCTCCAATTATGCTCTGCTTCCAAGGTTAAGGTGGACACCATCCTGATTGAGAGTGACTTGATTGCAAAGGCTATCATTGATCTGATTCCAATTCTTCAAATGAGAAAACTAGTGATTGGAGCCAGCAAATCCCAAATAAGAAAATTGAGATCAAGGAAAGGGAGTGGCATAGCTGATCAGGTACTTCAGAATGCTCCAGAAAGTTGCAAGGTGAGCTTTATATGTGAAGGAAAAGAAGTAAATGAACAGATAACTCGTGCCATTGCTACTGATCCTTCCATGTCCCAGAAAAACAACAAGCATCAGCAAAGTGCTTCATGTGTTTGTTTCAACTTTTAA 723 0.426 MSLSVEDNYYGRSSSVSEIEEENSSHLHLNDDGPNPMVTIGEEENEDEDTVYVAVGKSQSSMEALAWTLNNLATPSTMLYLIHIFPEIKLLPNPLGVGMIPKDQVSPEQVESYMAQERGKRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIPILQMRKLVIGASKSQIRKLRSRKGSGIADQVLQNAPESCKVSFICEGKEVNEQITRAIATDPSMSQKNNKHQQSASCVCFNF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1020 240 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 50 194 - -
Gso15g1020 240 MobiDBLite consensus disorder prediction 1 36 - -
Gso15g1020 240 CDD STK_N 50 205 - -
Gso15g1020 240 MobiDBLite consensus disorder prediction 1 18 - -
Gso15g1020 240 Gene3D HUPs 49 202 IPR014729 -
Gso15g1020 240 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 6 238 - -
Gso15g1020 240 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 6 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1020 Gso-Chr15 9578307 9580470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1020 48 224 U-box Gene Family AT2G45910 30.055 2.15e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1020 - - gmx:100781056 467.233