Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1016 ATGGGTGAACAATTGGGGCTGCTAAAAGTCATTGTTGTGCAAGGGAAAAGGTTGGTGATCCGGGATTTCAAGACCAGTGATCCTTATGTTGTGCTCAAGCTAGGGAATCAGACTGCAAAGACCAAGGTAATTAATAGCTGCTTGAATCCTGTTTGGAATGAGGAGCTGAATTTCACTCTGACAGAACCCTTGGGAGTTCTGAATTTGGAAGTGTTTGATAAAGATCTTCTGAAGGCTGATGACAAGATGGGGAATGCTTTCCTGAACCTTCAACCAATAGTCTCTGCAGCCAGATTAAGAGACATCTTAAGAGTGTCCTCTGGTGAGACGACATTAAGGAAGGTCATACCTGATGGTGAAAACTGTCTTGTCCGTGAAAGCAGTATCAACTGTGTGAATGGTGAGGTGGTGCAGAATGTTTGGTTAAGGCTTCGTGGAGTTGAGTCTGGGGAACTAGAATTGACCATCAAGTTGGTCACACATGTTGCTCCTGCAATATAG 501 0.4411 MGEQLGLLKVIVVQGKRLVIRDFKTSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKADDKMGNAFLNLQPIVSAARLRDILRVSSGETTLRKVIPDGENCLVRESSINCVNGEVVQNVWLRLRGVESGELELTIKLVTHVAPAI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1016 166 Gene3D C2 domain 3 163 IPR035892 -
Gso15g1016 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Gso15g1016 166 SMART C2_3c 7 102 IPR000008 -
Gso15g1016 166 Pfam C2 domain 7 99 IPR000008 -
Gso15g1016 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Gso15g1016 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 163 - -
Gso15g1016 166 PRINTS C2 domain signature 22 34 IPR000008 -
Gso15g1016 166 PRINTS C2 domain signature 46 59 IPR000008 -
Gso15g1016 166 PRINTS C2 domain signature 67 75 IPR000008 -
Gso15g1016 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gso15g1016 166 CDD C2_ArfGAP 5 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1016 Gso-Chr15 9546796 9549445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1016 1 157 C2H2 Transcription Factor Family AT4G05330 44.586 1.89e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1016 - - gmx:100779624 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1016 15 9546796 9549445 Gso9g0126 9 1099656 1102417 GST
Gso7g2274 7 46360197 46361662 Gso15g1016 15 9546796 9549445 PCT