Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0999 ATGGCTGAGTCGGACAACGAGTCCGGAGGTCACACGGGGAACGCAAGCGGAAGCAACGAATTCTCCGGTTGCAGGGAGCAAGACAGGTTCCTTCCGATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTGCCGGCGAACGCGAAGATCTCGAAGGAGGCGAAGGAGACGGTGCAGGAGTGCGTGTCGGAGTTCATCAGCTTCATAACAGGAGAAGCGTCCGATAAGTGCCAGAAGGAGAAGAGGAAGACGATCAACGGCGATGATCTGCTGTGGGCCATGACCACGCTGGGGTTCGAGGAGTACGTGGAGCCTCTCAAGGTTTATCTGCATAAGTATAGGGAGCTGGAAGGGGAGAAAACTGCTATGATGGGAAGGCCACATGAGAGGGATGAGGGTTATGGTCATGCAACTCCTATGATGATCATGATGGGGCATCAGCAGCAGCAGCATCAGGGACACGTGTATGGATCTGGAACTACTACTGGATCAGCATCTTCTGCAAGAACTAGATAA 516 0.5349 MAESDNESGGHTGNASGSNEFSGCREQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKVYLHKYRELEGEKTAMMGRPHERDEGYGHATPMMIMMGHQQQQHQGHVYGSGTTTGSASSARTR* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0999 171 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Gso15g0999 171 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 153 - -
Gso15g0999 171 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Gso15g0999 171 SUPERFAMILY Histone-fold 27 132 IPR009072 GO:0046982
Gso15g0999 171 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 153 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gso15g0999 171 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Gso15g0999 171 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Gso15g0999 171 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Gso15g0999 171 MobiDBLite consensus disorder prediction 1 23 - -
Gso15g0999 171 MobiDBLite consensus disorder prediction 148 171 - -
Gso15g0999 171 Gene3D Histone, subunit A 19 155 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0999 Gso-Chr15 9297280 9298572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0999 1 151 CCAAT-HAP3 Transcription Factor Family AT4G14540 69.048 5.19e-74 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gso15g0999 CBFD_NFYB_HMF 1.2e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0999 K08065 - gmx:100778034 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0999 15 9297280 9298572 Gso9g0118 9 1030725 1031863 GST
Gso7g2188 7 45615414 45620726 Gso15g0999 15 9297280 9298572 PCT