Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0979 ATGCAAACTTCTCAGAAGCACCCAACTTCAGCTGGTATCCATTTATACCACCAGCCTGCACAAGATATTGATCCCTACACTCATTACCAAATACTACAAAGCAATTCATGCCATGAAATCCATGATAATAGCAGCAGCCAGGGAACCACTATTTCTTTTGAAACCAGCAAGGATCAATACTTTACCCTTGAATCATCCCCAGTAATCAATGATCTCATAGGTTGTGATTCTCCTTCCTATGCTAGTGTGTCATCTAATAGGAGTCCTTTTTCTCCACAAGCTTCTCATTCATACCATTCTGACCAGCATCAGTCATCAGACAACACATATGGATCACCAACAAGTTCACACTCTACTGCTGATGACAGCTACGAATTGAAGAACAAGCTTAGAGAACTCGAGATTTCGTTGTTGGGGCCTGATTCAGACATTGTTGACAGTTGCCACTGCTCCTACAAGGGTGGTTGCCACGGAGCATCTCCAATGGCTAAATACAATTGGGATCAGATTGTGGAAATGATTCCAAAATTAAACTTGAAAGAAGTCCTCATTCGGTGTGCACAAGCCGTGGCTGATGATGATATTGAAACAGCAGTGGGATTTATGAACAATGTATTGGCAAAGATGGTATCAGTTGGGGGTGATCCAATTCAGAGGTTAGGTGCTTACATGTTGGAGGGTCTAAGAGCAAGGTTGGAGTCTTCAGGGAGCATAATCTACAAAGCCTTGAAATGTGAACAACCAACAAGCAATGATCTCATGACTTACATGCACATCCTGTACCAGATTTGCCCATATTGGAAGTTTGCTTACACATCTGCAAATGCTGTCATTGGAGAAGCAATGCTAAATGAATCAAGAATTCGCATAATTGACTTCCAAATTGCACAGGGGACTCAGTGGTTGTTGCTTATTCAGGCTCTTGCATCTCGTCCAGGTGGACCACCTTTCGTTCACGTAACCGGTGTTGATGATTCCCAATCATTTCATGCAAGGGGTGGAGGACTTCACATTGTAGGGAAACGCCTCTCAGATTATGCCAAATCTTGTGGAGTGCCATTTGAGTTCCACAGTGCTGCAATGTGTGGAAGTGAGGTTGAACTAGAAAACCTTGTAATTCAACCAGGGGAAGCACTAGTTGTGAACTTCCCTTTTGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCACAGAGACAGGCTATTGAGATTGGTCAAAAGCTTGTCACCCAAGGTTGTGACACTTGTTGAGCAAGAATCCAACACCAACACTTCTCCCTTTTTCCAAAGGTTTGCTGAGACCTTGAGTTACTACACTGCTATGTTTGAGTCCATAGATGTGGCCCTCCCCAGAGATGATAAGCAAAGGATCAATGCAGAACAACACTGCGTGGCTCGCGACATTGTTAACATGGTAGCTTGTGAGGGGGATGAGAGGGTGGAAAGGCATGAACTCTTGGGGAAGTGGAGGTCAAGATTTTCAATGGCTGGTTTTGCACCATGCCCTTTGAGTTCCTTAGTCACGGATGCAGTTAGAAATATGTTGAATGAATTCAATGAAAATTATAGGCTCGAATATAGAGATGGTGCTCTCTATCTAGGATGGAAGAATAGAGCTATGTGTACCTCTTCTGCTTGGAGATGTTACTGA 1659 0.4358 MQTSQKHPTSAGIHLYHQPAQDIDPYTHYQILQSNSCHEIHDNSSSQGTTISFETSKDQYFTLESSPVINDLIGCDSPSYASVSSNRSPFSPQASHSYHSDQHQSSDNTYGSPTSSHSTADDSYELKNKLRELEISLLGPDSDIVDSCHCSYKGGCHGASPMAKYNWDQIVEMIPKLNLKEVLIRCAQAVADDDIETAVGFMNNVLAKMVSVGGDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPTSNDLMTYMHILYQICPYWKFAYTSANAVIGEAMLNESRIRIIDFQIAQGTQWLLLIQALASRPGGPPFVHVTGVDDSQSFHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMCGSEVELENLVIQPGEALVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFAETLSYYTAMFESIDVALPRDDKQRINAEQHCVARDIVNMVACEGDERVERHELLGKWRSRFSMAGFAPCPLSSLVTDAVRNMLNEFNENYRLEYRDGALYLGWKNRAMCTSSAWRCY* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0979 552 MobiDBLite consensus disorder prediction 84 121 - -
Gso15g0979 552 ProSiteProfiles GRAS family profile. 170 550 IPR005202 -
Gso15g0979 552 MobiDBLite consensus disorder prediction 84 123 - -
Gso15g0979 552 Pfam GRAS domain family 179 550 IPR005202 -
Gso15g0979 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 549 IPR005202 -
Gso15g0979 552 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0979 Gso-Chr15 9113490 9117433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0979 1 550 GRAS Transcription Factor Family AT4G17230 58.590 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso15g0979 GRAS 1.3e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0979 - - gmx:100819190 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0979 15 9113490 9117433 Gso9g0097 9 871656 875485 GST
Gso7g2260 7 46211847 46215447 Gso15g0979 15 9113490 9117433 PCT
Gso17g0060 17 638286 641657 Gso15g0979 15 9113490 9117433 PCT