Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso15g0955 | ATGGCGGGGTCATGTTTCCACGGGCTTAGGCTAAGGATGTCTAAGAGTAAAGCTTTACCAGACCCTTCATCTTCCTCCAAGACCCAGTTGGAGAGTGACGCGGAGAACGTAGAAAGGAAGAGATTTGATAGCATGGAATCGTGGTCATTGATATTCGACTCAATGGAGACATGGGAGACTTCAAAGGAGGACCAGGAGGGAGAAAAAGAGGAATGGGCTGCAGACCTGTCTCAGCTTTTTATAGGTAGCAAGTTTGCTTCTGGAGCTCACAGCCGAATTTACCGTGGAATCTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAAGATTCCATCCCAGGATGAGGAGAAAAAGGCCTTACTAGAGGAGCAATTTAACTTTGAAGTGGCTTTGCTTTCACGTCTCATTCATCACAACATAGTGCAGTTTATTGCAGCATGTAAAAAACCGCCCGTGTACTGTATCATAACAGAATACATGTCACAAGGGACTCTGAGGATGTATCTAAACAAGAAAGAGCCGTACTCACTCTCAACGGAAACAATACTAAGGTTAGCTCTAGATATATCAAGGGGCATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAGCAATTTGCTTCTCGATGATGACATGAGGGTTAAGGTGGCGGATTTTGGTACATCTTGTCTTGAAACACGATGCCGGAAAAGCAAAGGGAACTCTGGAACATATCGTTGGATGGCACCGGAGATGGTTAAGGAAAAACCTTATACTCGCAAAGTTGACGTGTACAGTTTTGGTATTGTGCTTTGGGAGCTCACAACTGCTCTACTTCCCTTCCAAGGAATGACACCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAAAGGCCTCCTCTGCCAGCTAGTTGTCAACCAGCACTAGCACGTCTGATAAAGCGATGCTGGTCAGCAAACCCCTCGAAACGGCCAGATTTCAGTGATATTGTGTCTACTTTGGAGAAGTACGATGAGTGTGTGAAAGAGGGCCTAGCACTGAGTCATCATCATTCATCAGGCCTAGTCAGCAGAAATGTTATTATTGAACGCATAAAAGGCTGTGTATCAATGAGCTCCTCCATACCTGTACATGCTTGA | 1137 | 0.4538 | MAGSCFHGLRLRMSKSKALPDPSSSSKTQLESDAENVERKRFDSMESWSLIFDSMETWETSKEDQEGEKEEWAADLSQLFIGSKFASGAHSRIYRGIYKQRAVAVKMVKIPSQDEEKKALLEEQFNFEVALLSRLIHHNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSSNLLLDDDMRVKVADFGTSCLETRCRKSKGNSGTYRWMAPEMVKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALARLIKRCWSANPSKRPDFSDIVSTLEKYDECVKEGLALSHHHSSGLVSRNVIIERIKGCVSMSSSIPVHA* | 379 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso15g0955 | 378 | Gene3D | Transferase(Phosphotransferase) domain 1 | 162 | 364 | - | - | |
Gso15g0955 | 378 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 9 | 366 | - | - | |
Gso15g0955 | 378 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 201 | 213 | IPR008271 | GO:0004672|GO:0006468 | |
Gso15g0955 | 378 | Gene3D | Phosphorylase Kinase; domain 1 | 68 | 161 | - | - | |
Gso15g0955 | 378 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 333 | IPR011009 | - | |
Gso15g0955 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 157 | 170 | IPR001245 | GO:0004672|GO:0006468 | |
Gso15g0955 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 195 | 213 | IPR001245 | GO:0004672|GO:0006468 | |
Gso15g0955 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 241 | 251 | IPR001245 | GO:0004672|GO:0006468 | |
Gso15g0955 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 260 | 282 | IPR001245 | GO:0004672|GO:0006468 | |
Gso15g0955 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 304 | 326 | IPR001245 | GO:0004672|GO:0006468 | |
Gso15g0955 | 378 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 | 9 | 366 | - | - | |
Gso15g0955 | 378 | CDD | STKc_MAP3K-like | 86 | 333 | - | - | |
Gso15g0955 | 378 | ProSiteProfiles | Protein kinase domain profile. | 79 | 336 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso15g0955 | 378 | Pfam | Protein tyrosine and serine/threonine kinase | 81 | 333 | IPR001245 | GO:0004672|GO:0006468 | |
Gso15g0955 | 378 | MobiDBLite | consensus disorder prediction | 15 | 39 | - | - | |
Gso15g0955 | 378 | SMART | serkin_6 | 79 | 340 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso15g0955 | Gso-Chr15 | 8917481 | 8923133 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso15g0955 | 1 | 378 | MAP Kinase Kinase Kinase | AT1G62400 | 75.696 | 0.0 | 597 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Gso15g0955 | PK_Tyr_Ser-Thr | 8.1e-67 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso15g0955 | - | - | gmx:100806033 | 751.51 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g0955 | 15 | 8917481 | 8923133 | Gso9g0073 | 9 | 690492 | 695423 | GST | |
Gso7g2245 | 7 | 46075412 | 46079844 | Gso15g0955 | 15 | 8917481 | 8923133 | PCT | |
Gso17g0075 | 17 | 745613 | 750331 | Gso15g0955 | 15 | 8917481 | 8923133 | PCT |