Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0938 ATGGCTCGTGCCCGTTTCCCTCTTTCAATCCTTCTCTCTCTGGTCTTCGTTGCTCTTCCTCTTTCCCTCGCCAACACTGACCCTTCTGATGTTCAAGCTCTTGAGGTCATGTACAATGCGTTGAATAGTCCAACTCAGCTAACGGGTTGGAAAATCGGTGGTGGTGATCCATGTGGAGAGTCATGGAAAGGGGTAACGTGTGAGGGATCAGCCGTTGTTTCCATTAAACTCTCAGGTTTAGGACTCGATGGGACTCTGGGGTACCTGCTTTCGGACCTTATGTCACTCAGAGAGCTTGACTTAAGTGATAACAAGATCCATGATACAATTCCCTACCAGTTGCCACCGAATCTTACGAGCCTGAATTTTGCAAGAAATAATTTATCTGGAAATCTTCCTTATTCCATTTCTGCCATGGTTTCACTCAATTATTTGAATTTAAGCAATAATGCACTCTCCATGACAGTTGGCGATATTTTTGCTAGTCTTCAAGATCTTGGTACCCTGGATCTATCTTTCAATAACTTTTCTGGGGATCTTCCTCCTTCATTTGTTGCATTGGCCAATCTTTCTTCTCTTTTCTTGCAGAAGAACCAGTTGACTGGGTCTCTTGGTGTTCTCGTTGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATAATTTCAGTGGATGGATACCCCATGAGCTTAGTTCCATCCGTAATTTCATATATGATGGAAATTCATTTGAGAACAGTCCTGCTCCTCTTCCGCCAGCATTTACTTCACCTCCTCCCAATGGACCTCATGGTCGTCATCATTCTGGATCTGGTTCACATAATAAAACACAAGTTTCTGATAATGAAAAATCTGATGGCCATAAGGGTTTGACAGTGGGGGCTGTCGTAGGCATTGTTTTAGGTTCAGTGCTGGTGGCTGCCATTGTGCTCCTTGCTCTTGTTTTCTGTATCCGAAAGCAAAAGGGGAAAAAGGGTGCAAGAAATTTTAGTGGGAGCCTTCCTCGTGGAGTTATTAACGTAACTCCTCAGATGCAAGAGCAGAGGGTAAAAAGTGCTGCTGTTGTTACAGATCTCAAGCCTCGTCCTGCAGAAAATGTGACAGTTGAGAGGGTAGCTGTAAAAAGTGGATCTGTAAAGCAGATGAAGTCCCCTATAACTTCCACATTATACACAGTTGCTTCTCTCCAAAGTGCAACAAATAGCTTTAGTCAAGAATTTATTATTGGTGAAGGTTCTCTTGGCCGAGTTTACAAGGCTGATTTCCCAAATGGGAAGGTAATGGCTATTAAGAAGATCGACAACTCAGCTCTGTCATTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCTAATATGTCACGCTTGCGGCACCCAAGCATTGTGACATTGGCTGGATATTGTGCAGAGCATGGCCAACGACTTCTAGTTTATGAGTATATAGCAAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGCAAGGCATTGTCTTGGAATGCCCGTGTACGCATAGCACTTGGCACAGCCCGGGCTTTAGAGTACCTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCTGCAAATATATTACTCGATGAGGAGCTCAATCCTCACCTGTCTGACTGCGGTTTAGCTGCTTTGACACCAAACACTGAGCGACAGGTATCAACTCAGATGGTCGGTTCATTCGGTTATAGTGCTCCTGAGTTTGCATTATCAGGAGTATACACTGTAAAAAGTGATGTTTACAGCTTTGGGGTGGTTATGCTGGAACTATTGACTGGTCGGAAGCCACTTGACAGTTTGCGGGTTCGATCGGAGCAGTCACTTGTGAGGTGGGCTACACCCCAACTCCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTACTTTGAACGGCATGTATCCTGCAAAGTCACTGTCACGCTTTGCTGATATCATTGCCCTCTGTGTTCAGCCGGAACCCGAATTTCGACCTCCGATGTCTGAGGTGGTGCAAGCATTGGTTCGGTTAGTGCAAAGAGCAAGTGTGGTTAAAAGACGACCCAGTGAAGAATCTGGTTTTGGTCACAAGACCCCAGACCATGAGGCCATGGACATGCCATTTTAA 2133 0.444 MARARFPLSILLSLVFVALPLSLANTDPSDVQALEVMYNALNSPTQLTGWKIGGGDPCGESWKGVTCEGSAVVSIKLSGLGLDGTLGYLLSDLMSLRELDLSDNKIHDTIPYQLPPNLTSLNFARNNLSGNLPYSISAMVSLNYLNLSNNALSMTVGDIFASLQDLGTLDLSFNNFSGDLPPSFVALANLSSLFLQKNQLTGSLGVLVGLPLDTLNVANNNFSGWIPHELSSIRNFIYDGNSFENSPAPLPPAFTSPPPNGPHGRHHSGSGSHNKTQVSDNEKSDGHKGLTVGAVVGIVLGSVLVAAIVLLALVFCIRKQKGKKGARNFSGSLPRGVINVTPQMQEQRVKSAAVVTDLKPRPAENVTVERVAVKSGSVKQMKSPITSTLYTVASLQSATNSFSQEFIIGEGSLGRVYKADFPNGKVMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPSIVTLAGYCAEHGQRLLVYEYIANGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSLRVRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSEESGFGHKTPDHEAMDMPF* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0938 710 Gene3D Transferase(Phosphotransferase) domain 1 480 689 - -
Gso15g0938 710 Gene3D Phosphorylase Kinase; domain 1 363 479 - -
Gso15g0938 710 SUPERFAMILY L domain-like 27 235 - -
Gso15g0938 710 ProSiteProfiles Leucine-rich repeat profile. 95 116 IPR001611 GO:0005515
Gso15g0938 710 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Gso15g0938 710 ProSiteProfiles Protein kinase domain profile. 402 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0938 710 CDD STKc_IRAK 408 679 - -
Gso15g0938 710 PANTHER OS01G0253100 PROTEIN 24 706 IPR045271 GO:0004714|GO:0006468
Gso15g0938 710 MobiDBLite consensus disorder prediction 248 286 - -
Gso15g0938 710 MobiDBLite consensus disorder prediction 690 710 - -
Gso15g0938 710 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 24 706 - -
Gso15g0938 710 Pfam Protein kinase domain 405 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0938 710 Pfam Leucine rich repeat 95 152 IPR001611 GO:0005515
Gso15g0938 710 SUPERFAMILY Protein kinase-like (PK-like) 379 676 IPR011009 -
Gso15g0938 710 Gene3D Ribonuclease Inhibitor 27 260 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0938 Gso-Chr15 8715396 8722307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0938 139 710 Strubbelig Receptor Gene Family AT4G22130 71.080 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso15g0938 Pkinase 5.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0938 - - gmx:100803711 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0938 15 8715396 8722307 Gso9g0055 9 493502 500240 GST