Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0935 ATGACCACACACCCAACTACAAAATCAAAACCACCCCATGTTTTCTTCCTTCTCTTAATTCAGTTATTGATTTCGATTACAAGAGTCAAAGGTAGTTGCGTTACTGGCTGCAACCTTGCTTTAGCTTCCTATTACTTAGGGAACGGCACAAACCTCACTTACATTAGCAACCTCTTCGGAAGGCCAACATCGGAGATTCTAAAATACAACCCAAGTGTTAAGAACCCAAACGTGATTCTTAGCCAAACACGGATCAACGTGCCCTTTTCGTGTGACTGCTTGAACGGTGCGTTTTTGGGGCACACTTTCTCGTACGCGATCCAACACGGAAACACGTACAAGATAGTTGCCGAGGTTGATTTCTCGAACCTCACGACGGAGGATTGGGTTGGCAGGGTCAACAGTTACCCGCCGAATCAGATACCCGACAACGTGAACATCAACGTCACCGTTAACTGTTCCTGCGGAAACCGACACGTGTCCAAGGATTATGGGCTGTTCATGACGTACCCGCTTCGGGTCGGTGACAGCTTACAGCGGGTTGCGGCCGAAGCCGGCGTGCCGGCGGAGCTGCTGCTGAGGTACAACCCCACGGCGGATTTCGGTGCTGGGAATGGACTCGTGTTTGTGCCGGCTAAAGATGAAAATGGAAACTTTCCACCAATGCAGTTGAGATCAGGAATATCTAGTGGAGCCATTGCTGGCATAGCTGTTGGAGGAGCTGTTGGGGTCTTAATTTTGGCACTTCTTCTATATGTTGGACTACGCAGAAGAAGGAAAGTGGCTGAGGTATCCCTTCTCCCAGTCCCAGGAGCATCTGAAGATCAGTGTAGTCCACTCCAACTCCATCATGGTATTGGTTGTGGAAGCAGCTTGGACAAGGCATCTGAATCTTCTGTTGTAGCCTCTCCAAGGTTGACAGGGATTACAGTGGACAAGTCAGTGGAGTTCCCATATGAGGAGCTAGACAAGGCTACTGATGGCTTTAGTGCGGCTAATATAATTGGTCGAGGTGGCTTTGGATCTGTTTACTATGCTGAGCTCCGGAATGAGAAAGCTGCAATTAAAAAGATGGATATGCAAGCATCAAATGAATTCCTTGCAGAATTAAATGTTCTTACACACGTCCATCACTTGAACTTGGTGAGGTTAATAGGATATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAGTACATTGAGAACGGCAATTTAAGTCAACATTTGCGAGGCTCAGGGAGGGATCCGTTAACATGGGCAGCTCGAGTTCAAATTGCCCTTGATGCAGCAAGAGGATTGGAATACATCCATGAGCACACTGTTCCTGTCTACATCCATAGAGATATTAAATCAGCAAACATTTTGATAGACAAAAACTTTCGTGCAAAGGTTGCAGATTTTGGTCTCACAAAATTGACCGAATATGGTAGTTCTTCATTACATACGCGTCTTGTGGGTACATTTGGTTATATGCCTCCAGAATATGCACAATATGGTGATGTGTCCTCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTCATATCAGGCAAGGAAGCTATTGTCAGGACAAACGAACCTGAGAATGAATCAAAAGGACTAGTTGCCTTGTTTGAAGAAGTTCTTGGTCTGTCAGATCCAAAAGTAGATCTTCGTCAACTTATTGACCCTACACTTGGTGACAACTACCCTCTTGACTCGGTATTTAAGGTGTCTCAGCTTGCCAAAGCATGTACACATGAGAACCCTCAACTTAGGCCAAGCATGAGATCAATTGTAGTTGCCTTAATGACACTTTCATCTGCAACTGAGGATTGGGATGTTGGCTCCTTCTATGAAAACCAAGCTTTGGTGCACCTAATGTCTGGAAGGTAG 1884 0.4528 MTTHPTTKSKPPHVFFLLLIQLLISITRVKGSCVTGCNLALASYYLGNGTNLTYISNLFGRPTSEILKYNPSVKNPNVILSQTRINVPFSCDCLNGAFLGHTFSYAIQHGNTYKIVAEVDFSNLTTEDWVGRVNSYPPNQIPDNVNINVTVNCSCGNRHVSKDYGLFMTYPLRVGDSLQRVAAEAGVPAELLLRYNPTADFGAGNGLVFVPAKDENGNFPPMQLRSGISSGAIAGIAVGGAVGVLILALLLYVGLRRRRKVAEVSLLPVPGASEDQCSPLQLHHGIGCGSSLDKASESSVVASPRLTGITVDKSVEFPYEELDKATDGFSAANIIGRGGFGSVYYAELRNEKAAIKKMDMQASNEFLAELNVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDPLTWAARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSSKIDVYAFGVVLYELISGKEAIVRTNEPENESKGLVALFEEVLGLSDPKVDLRQLIDPTLGDNYPLDSVFKVSQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVHLMSGR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0935 627 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 15 627 IPR044812 GO:0019199|GO:0045087
Gso15g0935 627 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Gso15g0935 627 Gene3D Phosphorylase Kinase; domain 1 309 399 - -
Gso15g0935 627 Gene3D Transferase(Phosphotransferase) domain 1 400 611 - -
Gso15g0935 627 TIGRFAM GlyGly_CTERM: GlyGly-CTERM domain 239 259 IPR020008 -
Gso15g0935 627 ProSiteProfiles Protein kinase domain profile. 329 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0935 627 Pfam Protein tyrosine and serine/threonine kinase 332 598 IPR001245 GO:0004672|GO:0006468
Gso15g0935 627 ProSiteProfiles LysM domain profile. 42 87 IPR018392 -
Gso15g0935 627 SUPERFAMILY Protein kinase-like (PK-like) 309 599 IPR011009 -
Gso15g0935 627 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 15 627 - -
Gso15g0935 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Gso15g0935 627 SMART serkin_6 329 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0935 Gso-Chr15 8685946 8693820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0935 17 627 Receptor kinase-like Gene Family AT3G21630 55.233 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso15g0935 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0935 - K13429 gmx:100802308 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0935 15 8685946 8693820 Gso15g0935 15 8685946 8693820 ECH
Gso15g0935 15 8685946 8693820 Gso9g0052 9 470274 472759 GST