Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0916 ATGAAGAAGGGTGAAAAAGCTCAGAGTGAGAGTTCTCTCAAACGCTCCCCACCTTCAACCATGTCTTCCTCCTCCTCTTCTCTTATCACCACTGTTGTTGTTCATAATAATAATAATAATAATCCTTCTCAACCTTCTGAGTTAAGAGCCACGACACGTTGTTGTTTTGGCTCTCATCACCTTCCTGACATAAGCCTCAAAACTCCTATGGCTAGGCCTTATGTTCGATCAAAAATGCCTAGGCTTCGTTGGACACCAGATCTCCATCGTTGCTTCGTGCATGCAGTTCAAAGACTTGGAGGAGAAAACAGGGCCACACCAAAGTTGGTTTTACAGCTCATGAATGTAAAGGGGCTTACTATATCTCATGTCAAAAGCCATCTTCAGATGTACAGGAGCATGAGACACGAGCAGATGAGTCAAGGTGCAAAGAAGAATGATATGGCTCCGGATTTCCTTGCTTCCACACTCTCAACTCTTGGCCAAAGGCAACAGAATCCTCACAAAAGAAGCTGCACGGAAGAGCTTGTTCCCACCCAAGCTCAATGGAATCATGATGAGCAAGAGTGTCACAATGGAAACCAAGGGGGTGAATCGATTATAATTTATAACGGCAATGAACAGAAGGTGCACTCCTACATCATCTTCGAGGGTCTTCTGAGAGGCCAGTCTGTCCAAGAGAATAAAACTACTACTCCTGAGAAGGTGTCACTAGGTGATGCCGGTGATGAAAGGGACCATCAAAGATTCCAAGACACACTGTCCCTTTCAATGAGCTCAAGGCCCTCTTCACATTCGTTCTTGAATCGGAGCCACACTGGTCCAGATGCCAATGATGTCTCTCTTGAGCTCACGCTCTGTTAG 864 0.4549 MKKGEKAQSESSLKRSPPSTMSSSSSSLITTVVVHNNNNNNPSQPSELRATTRCCFGSHHLPDISLKTPMARPYVRSKMPRLRWTPDLHRCFVHAVQRLGGENRATPKLVLQLMNVKGLTISHVKSHLQMYRSMRHEQMSQGAKKNDMAPDFLASTLSTLGQRQQNPHKRSCTEELVPTQAQWNHDEQECHNGNQGGESIIIYNGNEQKVHSYIIFEGLLRGQSVQENKTTTPEKVSLGDAGDERDHQRFQDTLSLSMSSRPSSHSFLNRSHTGPDANDVSLELTLC* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0916 287 Gene3D - 79 137 - -
Gso15g0916 287 MobiDBLite consensus disorder prediction 252 275 - -
Gso15g0916 287 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 32 266 - -
Gso15g0916 287 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 80 133 IPR006447 GO:0003677
Gso15g0916 287 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 32 266 IPR044848 GO:0003700
Gso15g0916 287 MobiDBLite consensus disorder prediction 1 27 - -
Gso15g0916 287 Pfam Myb-like DNA-binding domain 82 132 IPR001005 -
Gso15g0916 287 MobiDBLite consensus disorder prediction 11 27 - -
Gso15g0916 287 MobiDBLite consensus disorder prediction 226 275 - -
Gso15g0916 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 136 IPR017930 -
Gso15g0916 287 SUPERFAMILY Homeodomain-like 78 134 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0916 Gso-Chr15 8547417 8551532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0916 71 135 G2-like Transcription Factor Family AT1G14600 76.923 2.46e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso15g0916 Myb_DNA-binding 8.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0916 - - gmx:100795931 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0916 15 8547417 8551532 Gso9g0034 9 339968 343948 GST