Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0912 ATGGCTGAGGCTACACAATCTAATGCTGAGTTGTTGGAGTGGCCTAAGAAAGATAAGCGCCGCTTCCTGCATGTTGTGTATCGTGTTGGTGATCTTGATCGCACCATTAAGTTTTATACTGAATGTTTTGGGATGAAGCTTTTGAGGAAAAGAGATATTCCAGAGGAGAAATATGCCAATGCTTTTCTTGGATTTGGCCCTGAACAATCCCATTTTGTTGTGGAATTAACATATAATTATGGGGTGACCTCATATGATATTGGAACTGGATTTGGACATTTTGCTATCGCAACTCCAGATGTTTACAAATTGGTTGAAGACATCCGGGCTAAGGGTGGAAATGTCACCAGGGAGCCTGGTCCAGTTAAGGGTGGGAAATCTGTTATTGCCTTCGTGAAGGATCCTGATGGTTATGCTTTTGAGCTCATTCAAAGACCTTCAACCCCTGAACCATTGTGCCAAGTAATGCTTCGCGTTGGTGATTTAGAGCGCTCAATTAAGTTTTATGAAAAGGCTTTGGGTTTGAGGGTGGTAAAGAAGACTGATAGACCTGAATACAAGTATACTATAGCTATGCTTGGGTATGCAGAGGAACATGAGACAACTGTGTTGGAGCTGACATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGTACTGATGATGTATACAAGAGTGCTGAGGTTGTCAACATAGTCACACAAGAGCTTGGAGGGAAGATTACTCGGCAACCAGGACCAATTCCTGGCCTTAACACAAAGATCACTGCTTTCTTAGATCCTGATGGATGGAAAACTGTTTTGGTTGACAATCAAGATTTTCTGAAGGAGCTGGAGTAA 864 0.4225 MAEATQSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTREPGPVKGGKSVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVVKKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVNIVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0912 287 Gene3D - 1 147 IPR029068 -
Gso15g0912 287 PANTHER LACTOYLGLUTATHIONE LYASE 11 287 - -
Gso15g0912 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 149 IPR029068 -
Gso15g0912 287 ProSitePatterns Glyoxalase I signature 1. 24 45 IPR018146 GO:0004462|GO:0046872
Gso15g0912 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 22 142 IPR004360 -
Gso15g0912 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 273 IPR004360 -
Gso15g0912 287 ProSitePatterns Glyoxalase I signature 1. 154 175 IPR018146 GO:0004462|GO:0046872
Gso15g0912 287 TIGRFAM glyox_I: lactoylglutathione lyase 152 282 IPR004361 GO:0004462|GO:0046872
Gso15g0912 287 TIGRFAM glyox_I: lactoylglutathione lyase 8 154 IPR004361 GO:0004462|GO:0046872
Gso15g0912 287 ProSitePatterns Glyoxalase I signature 2. 88 100 IPR018146 GO:0004462|GO:0046872
Gso15g0912 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 145 IPR037523 -
Gso15g0912 287 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 11 287 - -
Gso15g0912 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 151 279 IPR037523 -
Gso15g0912 287 Gene3D - 148 287 IPR029068 -
Gso15g0912 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 152 279 IPR029068 -
Gso15g0912 287 CDD GlxI_Ni 23 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0912 Gso-Chr15 8510439 8516022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0912 154 278 Calmodulin-binding Proteins AT1G08110 28.667 6.08e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0912 K01759 - gmx:100799447 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0912 15 8510439 8516022 Gso15g0912 15 8510439 8516022 ECH
Gso15g0912 15 8510439 8516022 Gso9g0032 9 315798 319850 GST
Gso7g2216 7 45842379 45846107 Gso15g0912 15 8510439 8516022 PCT