Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0894 ATGGGTTGCCTTCCATGCTGCAAGTCAAAAGCTGAATCATCCTCTTCAACTGCATCCTCCGGCAAAATTTCCAAAGGAAGGAGAACATTCAAATCTTTGGCTTCAGCTATGTCACATAAAACAGGTAGCAGCAGGCAAAGACGAATAGATGCAGAGATAAGAAAATATGGATCTGCAAAAAACGATGTCAAAGTATTCACATATGCACAACTTGCTGAAGCTACAAACAACTACAATCCTGATTGCCTGGTGGGCAAAGGTGGATTCGGGAATGTCTACAAAGGATTCTTAAAAAGTGTTGATCAAACTGTAGCTGTGAAGGTACTGAACAGGGAAGGAGTGCAAGGAACACATGAATTTTTCGCAGAAATTTTGATGTTGAGCATGGTGCAACACCCAAATCTCGTGAAGCTCATTGGTTATTGTGCAGAAGACCATCATAGGATTTTGGTTTATGAATTCATGGCCAATGGGAGTTTGGAAAATCACCTTCTAGACATAGGTGCATATAAGGAGCCTTTGGATTGGAAAAACAGAATGAAAATAGCTGAGGGAGCAGCTAGAGGACTTGAATATTTGCATAACAGTGCAGAACCAGCTATTATATACCGTGATTTTAAATCATCTAATATACTATTAGATGAAAATTTTAATCCAAAGCTCTCTGATTTTGGACTTGCTAAGATTGGTCCAAAAGATGGTCAGGACCATGTGTCAACTAGGGTGATGGGGACTTTTGGTTATTGTGCACCAGAGTATGCTGCTTCGGGTCAGCTTAGCACAAAATCAGATATTTATAGTTTTGGGGTTGTGTTTTTGGAAATAATCACAGGTAGGAGGGTATTTGACGCTTCAAGAGCTACAGAAGAGCAAAACTTGATTGAGTGGGCACAACCTTTGTTTAAGGACAGAACGAAGTTCACTCTAATGGCTGACCCTTTGCTTAAAGGTCAGTTCCCTGTGAAGGGTCTATTTCAAGCCCTTGCAGTGGCAGCAATGTGTCTCCAAGAGGAAGCTGACACACGACCTTACATGGATGATGTTGTGACGGCTCTTGCACATCTAGCAGTGCAAAGAGTTGAAGAAAAAGACACAGCTGGTGAATCTGTAAAATGTGCCGGGCATGTTGAATATTTTAAAGCTATAAGTTCAGCTGGATCTGAGAGGGCGTAG 1173 0.4143 MGCLPCCKSKAESSSSTASSGKISKGRRTFKSLASAMSHKTGSSRQRRIDAEIRKYGSAKNDVKVFTYAQLAEATNNYNPDCLVGKGGFGNVYKGFLKSVDQTVAVKVLNREGVQGTHEFFAEILMLSMVQHPNLVKLIGYCAEDHHRILVYEFMANGSLENHLLDIGAYKEPLDWKNRMKIAEGAARGLEYLHNSAEPAIIYRDFKSSNILLDENFNPKLSDFGLAKIGPKDGQDHVSTRVMGTFGYCAPEYAASGQLSTKSDIYSFGVVFLEIITGRRVFDASRATEEQNLIEWAQPLFKDRTKFTLMADPLLKGQFPVKGLFQALAVAAMCLQEEADTRPYMDDVVTALAHLAVQRVEEKDTAGESVKCAGHVEYFKAISSAGSERA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0894 390 PANTHER OS07G0668900 PROTEIN 1 388 - -
Gso15g0894 390 CDD STKc_IRAK 84 352 - -
Gso15g0894 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gso15g0894 390 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Gso15g0894 390 ProSiteProfiles Protein kinase domain profile. 78 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0894 390 Gene3D Transferase(Phosphotransferase) domain 1 155 376 - -
Gso15g0894 390 Pfam Protein kinase domain 83 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0894 390 Gene3D Phosphorylase Kinase; domain 1 37 154 - -
Gso15g0894 390 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 388 - -
Gso15g0894 390 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0894 Gso-Chr15 8328000 8332702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0894 1 357 Glycoside Hydrolase AT3G07070 52.893 2.43e-135 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso15g0894 Pkinase 5.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0894 - - gmx:100790828 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0894 15 8328000 8332702 Gso11g2362 11 39601520 39604090 GST