LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso15g0867	ATGCTTCCTGATCAGAGAAAAAAGTCATCTGTAGAGGTGGACTTCTTTACTGAATACGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATTAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGCGAGATTAAGCTTCTTAGACTTTTACGCCATCCAGATATTGTGGAGATCAAACATATTCTGTTGCCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTCTTCGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCTAATGATGATCTGACACCAGAACATTACCAGTTTTTCTTGTATCAGCTTCTACGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGTGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACTCCCACTGCTATTTTCTGGACAGATTATGTTGCAACACGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTTTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCTGAACTTTTGACCGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTTCATCAACTAGACCTTATGACTGATCTTCTTGGAACTCCATCTCTTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGGAGATATTTGAGCAGCATGCGAAAGAAGAAGCCAGTTCCTTTCTCGCAGAAGTTTCCTCATGCAGACCCCCGTGCTCTTCGTTTGTTAGAAAGAATGTTGGCATTTGAGCCTAAGGATCGGCCTACTGCAGAAGAGGCTCTAGCGGATCCATATTTTAAAGGCTTGGCAAAGGTTGAGAGAGAACCATCTGCTCAGCCAGTTACCAAGATGGAGTTTGAATTTGAGAGACGCCGGATAACAAAGGAAGATGTACGAGAGCTTATATACCGAGAGACTTTGGAGTACCATCCGAAGATGTTGAAGGAATTTCTAGAAGGAGCAGAGCCAACAGGTTTCATGTATCCAAGTGCTGTGGATCACTTCAAGAAACAATTTGCATATCTTGAGGAGCATTACGGCAAAGGGGGAACTGTTGCTCCGCCTGAGAGGCAACATGCATCATTACCGAGACCTTGTGTGTTGTATTCAGACCACTCAATGCAGAACACATCTGAGGTTGCAGATGATCTATCCAAATGTTGCATCAAAGAAGTTGAGAAACAACCCATAGAAAGGAGTAGTGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAACAACTGTGGGGTAGCAGTGACGGCCGAGGCTGAACAGCGGAGGGTGGTCAGGAATCCATCTGTTTCAGCTCAGTATGCAGCATCGAGCTGTTCATATCCTAGGAGAAACCCAGGCTATAAAAATGAGAGGGGGGCAGAGGATGATGGGATTGAAGGTTCAAATGGACTGCAGCCAAAGTACATGGCAAGAAAAGTGGCTGCTGCTCAAGCTGGACCTGGTGGTCAGTGGTATTGA	1686	0.4359	MLPDQRKKSSVEVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSLEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPRALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRETLEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDHSMQNTSEVADDLSKCCIKEVEKQPIERSSAIPMSRLPLQAPQNIQGVAARPRKVVGSVMRYNNCGVAVTAEAEQRRVVRNPSVSAQYAASSCSYPRRNPGYKNERGAEDDGIEGSNGLQPKYMARKVAAAQAGPGGQWY*	562

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso15g0867	561	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	9	478	-	-
Gso15g0867	561	Gene3D	Phosphorylase Kinase; domain 1	40	361	-	-
Gso15g0867	561	Pfam	Protein kinase domain	25	316	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gso15g0867	561	SMART	serkin_6	25	316	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gso15g0867	561	ProSiteProfiles	Protein kinase domain profile.	25	316	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gso15g0867	561	MobiDBLite	consensus disorder prediction	516	536	-	-
Gso15g0867	561	Gene3D	Transferase(Phosphotransferase) domain 1	111	339	-	-
Gso15g0867	561	ProSitePatterns	Protein kinases ATP-binding region signature.	31	55	IPR017441	GO:0005524
Gso15g0867	561	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	9	478	-	-
Gso15g0867	561	ProSitePatterns	MAP kinase signature.	60	163	IPR003527	GO:0004707\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso15g0867	Gso-Chr15	7987758	7994019	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso15g0867	1	561	MAP Kinase Gene Family	AT5G19010	80.314	0.0	936

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Gso15g0867		Pkinase	1.3e-68	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso15g0867	-		K04371	gmx:100781957	1132.86

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Gso15g0867	15	7987758	7994019	Gso11g2399	11	40010388	40016857	GST
Gso7g2161	7	45370039	45376755	Gso15g0867	15	7987758	7994019	PCT
Gso17g0148	17	1395320	1407954	Gso15g0867	15	7987758	7994019	PCT
Gso15g0867	15	7987758	7994019	Gso7g2161	7	45370039	45376755	PCT
Gso15g0867	15	7987758	7994019	Gso17g0148	17	1395320	1407954	PCT

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