Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0867 ATGCTTCCTGATCAGAGAAAAAAGTCATCTGTAGAGGTGGACTTCTTTACTGAATACGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATTAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGCGAGATTAAGCTTCTTAGACTTTTACGCCATCCAGATATTGTGGAGATCAAACATATTCTGTTGCCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTCTTCGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCTAATGATGATCTGACACCAGAACATTACCAGTTTTTCTTGTATCAGCTTCTACGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGTGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACTCCCACTGCTATTTTCTGGACAGATTATGTTGCAACACGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTTTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCTGAACTTTTGACCGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTTCATCAACTAGACCTTATGACTGATCTTCTTGGAACTCCATCTCTTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGGAGATATTTGAGCAGCATGCGAAAGAAGAAGCCAGTTCCTTTCTCGCAGAAGTTTCCTCATGCAGACCCCCGTGCTCTTCGTTTGTTAGAAAGAATGTTGGCATTTGAGCCTAAGGATCGGCCTACTGCAGAAGAGGCTCTAGCGGATCCATATTTTAAAGGCTTGGCAAAGGTTGAGAGAGAACCATCTGCTCAGCCAGTTACCAAGATGGAGTTTGAATTTGAGAGACGCCGGATAACAAAGGAAGATGTACGAGAGCTTATATACCGAGAGACTTTGGAGTACCATCCGAAGATGTTGAAGGAATTTCTAGAAGGAGCAGAGCCAACAGGTTTCATGTATCCAAGTGCTGTGGATCACTTCAAGAAACAATTTGCATATCTTGAGGAGCATTACGGCAAAGGGGGAACTGTTGCTCCGCCTGAGAGGCAACATGCATCATTACCGAGACCTTGTGTGTTGTATTCAGACCACTCAATGCAGAACACATCTGAGGTTGCAGATGATCTATCCAAATGTTGCATCAAAGAAGTTGAGAAACAACCCATAGAAAGGAGTAGTGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAACAACTGTGGGGTAGCAGTGACGGCCGAGGCTGAACAGCGGAGGGTGGTCAGGAATCCATCTGTTTCAGCTCAGTATGCAGCATCGAGCTGTTCATATCCTAGGAGAAACCCAGGCTATAAAAATGAGAGGGGGGCAGAGGATGATGGGATTGAAGGTTCAAATGGACTGCAGCCAAAGTACATGGCAAGAAAAGTGGCTGCTGCTCAAGCTGGACCTGGTGGTCAGTGGTATTGA 1686 0.4359 MLPDQRKKSSVEVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSLEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPRALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRETLEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDHSMQNTSEVADDLSKCCIKEVEKQPIERSSAIPMSRLPLQAPQNIQGVAARPRKVVGSVMRYNNCGVAVTAEAEQRRVVRNPSVSAQYAASSCSYPRRNPGYKNERGAEDDGIEGSNGLQPKYMARKVAAAQAGPGGQWY* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0867 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Gso15g0867 561 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Gso15g0867 561 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0867 561 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0867 561 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0867 561 MobiDBLite consensus disorder prediction 516 536 - -
Gso15g0867 561 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Gso15g0867 561 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gso15g0867 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Gso15g0867 561 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso15g0867 561 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Gso15g0867 561 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0867 Gso-Chr15 7987758 7994019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0867 1 561 MAP Kinase Gene Family AT5G19010 80.314 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso15g0867 Pkinase 1.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0867 - K04371 gmx:100781957 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0867 15 7987758 7994019 Gso11g2399 11 40010388 40016857 GST
Gso7g2161 7 45370039 45376755 Gso15g0867 15 7987758 7994019 PCT
Gso17g0148 17 1395320 1407954 Gso15g0867 15 7987758 7994019 PCT
Gso15g0867 15 7987758 7994019 Gso7g2161 7 45370039 45376755 PCT
Gso15g0867 15 7987758 7994019 Gso17g0148 17 1395320 1407954 PCT