Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0864 AAACCCCACCTTAACGTGGGCACAATTGGGCATGCTGATCACGGGAAAACCACACTAACTGCTGCAATTACCAAGGTGCTAGCTGAAGAAAGTAAAGCCAAGGCGGCCTTTGAGGACATAGACAAGGCTCCTGAGGAGAAGAAGAGAGGAATTACTGTTGCGACTGCTCATGTAGAATATGAGACAGCAAAGAGGCACTATGCCCATGTTGATTGCCCAGGGCATGCAGACTATGTTAAGAACATGATAACTGGAGCTGAACAAATGGATGGTGGAATTCTTGTGGTTTCTGCTCCAGATGGGCCAATGCCTCAAACAAAGGAACACATACTGCTTGCTCGCCAGGTTGGTGTGCCATCATTGTTCTGCTTTCTAAATAAGGTTGATGCTGTTGATGATCCAGAGCTGCTTGAACTTGTAGAAATGGAGCTTCGCGAACTGCTTAATTTCTACAAATTTCCTGGGGATGAGATTCCAATTGTACGAGGTTCTGCCCTGTCTGCATCGCAGGGAACTAATGAAGAACTTGGAAAGAAGGCTATCTTAAAACTAATGGATGCTTTGGATGAATACATTTCGGATCCTGTGCGGCAACTTGATAAGCCTTTCTTAATGCCAGTAGATGATGTTTTCTCAATTATGGGGCGTGGAACTGTTGTGACTGGTCGTGTTGAACAAGGCACCATCAAAGTAGGTGAGGAGGTTGAAGTATTGGGACTAACACAGAGTGGACCTTTGAAGACTACTGTAACTGGTGTGGAAATGTTCAAGAAAATTTTGGATCGAGGGGAAGCTGGTGATAATGTGGGACTTCTTCTACGTGGTCTGAAGCGCGATGATGTACAGCGAGGAATGGTCGTGACCAAGCCTGGTGCATTTAAAACATATAAGAAGTTCGAAGCAGAGATTTATGTCCTCTCAAAAGATGAAGGTGGCCGTCATACTGCTTTTTCCTCTAACTATAAGCCACAGTTTTACTTGAGGACTGCAGATGTTACCGGAAAGGTGGAATTACCAGAAAGTGTTAAGATGGTTATGCCTGGTGATAATGTGACTGCAACTTTTGAGCTGATATCACCTGTTCCTCTTGAAATAGGACAAAGATTTGCTTTGAGAGAGGGAGGCAGAACAGTAGGTGCAGGAGTTGTCTCCAAAGTGATGGCTTAG 1167 0.4464 KPHLNVGTIGHADHGKTTLTAAITKVLAEESKAKAAFEDIDKAPEEKKRGITVATAHVEYETAKRHYAHVDCPGHADYVKNMITGAEQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLFCFLNKVDAVDDPELLELVEMELRELLNFYKFPGDEIPIVRGSALSASQGTNEELGKKAILKLMDALDEYISDPVRQLDKPFLMPVDDVFSIMGRGTVVTGRVEQGTIKVGEEVEVLGLTQSGPLKTTVTGVEMFKKILDRGEAGDNVGLLLRGLKRDDVQRGMVVTKPGAFKTYKKFEAEIYVLSKDEGGRHTAFSSNYKPQFYLRTADVTGKVELPESVKMVMPGDNVTATFELISPVPLEIGQRFALREGGRTVGAGVVSKVMA* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0864 388 TIGRFAM EF-Tu: translation elongation factor Tu 1 387 IPR004541 GO:0003746|GO:0005525|GO:0006414
Gso15g0864 388 Gene3D Translation factors 332 387 - -
Gso15g0864 388 TIGRFAM small_GTP: small GTP-binding protein domain 5 141 IPR005225 GO:0005525
Gso15g0864 388 SUPERFAMILY Translation proteins 197 292 IPR009000 -
Gso15g0864 388 CDD EFTU_III 294 383 - -
Gso15g0864 388 Pfam Elongation factor Tu C-terminal domain 294 386 IPR004160 -
Gso15g0864 388 Pfam Elongation factor Tu domain 2 217 288 IPR004161 GO:0005525
Gso15g0864 388 CDD EFTU_II 203 291 IPR033720 -
Gso15g0864 388 CDD EF_Tu 2 195 IPR041709 -
Gso15g0864 388 Hamap Elongation factor Tu [tuf]. 1 388 IPR004541 GO:0003746|GO:0005525|GO:0006414
Gso15g0864 388 PANTHER ELONGATION FACTOR TU 1 387 - -
Gso15g0864 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 218 IPR027417 -
Gso15g0864 388 PRINTS GTP-binding elongation factor signature 5 18 IPR000795 GO:0003924|GO:0005525
Gso15g0864 388 PRINTS GTP-binding elongation factor signature 48 56 IPR000795 GO:0003924|GO:0005525
Gso15g0864 388 PRINTS GTP-binding elongation factor signature 68 78 IPR000795 GO:0003924|GO:0005525
Gso15g0864 388 PRINTS GTP-binding elongation factor signature 84 95 IPR000795 GO:0003924|GO:0005525
Gso15g0864 388 PRINTS GTP-binding elongation factor signature 121 130 IPR000795 GO:0003924|GO:0005525
Gso15g0864 388 PANTHER ELONGATION FACTOR TU-RELATED 1 387 - -
Gso15g0864 388 Pfam Elongation factor Tu GTP binding domain 1 192 IPR000795 GO:0003924|GO:0005525
Gso15g0864 388 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 41 56 IPR031157 -
Gso15g0864 388 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 196 IPR000795 GO:0003924|GO:0005525
Gso15g0864 388 Gene3D Translation factors 198 328 - -
Gso15g0864 388 Gene3D - 1 195 IPR027417 -
Gso15g0864 388 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 297 388 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0864 Gso-Chr15 7970757 7974347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0864 1 386 Eukaryotic Initiation Factors Gene Family AT5G60390 30.324 9.14e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0864 K02358 - gmx:102662879 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0864 15 7970757 7974347 Gso11g2402 11 40031825 40036748 GST