Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0845 ATGACCGATGAACAACGAGAACCACAAGCTTCCCCGAGCAATGGCGTCCACAAGTTAGAAAGAAAACAAATAGCTGAAAGGGAGAGATCGGTTTTTAGAGGCAGGCGTCCACGACCTGGGTTTTCTGATTCATTTTCAAGCGTTGACCTGGAAGCTTTAGAGATTGAAGAGGGCTCTCCTAGGAGTCAAGGGTCTGAAACCCCAAGTTCAAGGGCCAGCACTTCTGATTCGGAGAGTCAGGGATCTTTTGCTGGGACACCTAATAACAATAACCAGTGGCGTGGTTTCTTTAAACTACTCAAGAAAGGATCCCAAATGCCTTTCCAAACTTTTCACCCACTTAAAAATGTTCCAAAACTGACAAGAAGAAAAAGCAAGAGAATCAGGGAGGACCTCATTCCATCACTGAATGCAGCATCTCTTGACACTGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCACCCTCGCGGAGATCCAGGCTGCAACTGATGACTTTAGCCATGAAAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTACTTGGGCAAATTGGAGGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGTGCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTGCACGTGGACCACCCCAACATAGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCCTGTCATCCATACTTTATGGACCTAGAGAGAAACTGAATTGGAGCCTCAGATATAAGATTGCTATGGGGACTGCTGAGGGCCTTCGCTATCTGCATGAGGGGTGTCAAAGAAGGATCATTCACAAAGACATCAAGGCTTCTAATATTCTTCTCTCAGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTCTCAAAAGTGGAAGGCACATTCGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTACTATTATTGGAGCTCATTACTGGTCGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTAACTGCAAATAACATCAAAGAGCTTGTGGATCCAGTTTTGGCTGATGCTTATGATGAAGAGCAGATGAAGCTTGTAACCTTAACAGCTTCTCTCTGTGTAGACCAGTCCTCAATTCAGCGACCGGTTATGAGCCAGGTGTTAGATATACTAAGAGGGGAAGAAGAGAGCTTAAGAATCATGAAAGAACGATCGAAGTCAAAACTTCAGAGGACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACAAAGTTTTTGAGTGAGAGGGATCGACATATGGAGACTATTCTAGGCTGCAGTAGCTCTGTTACAGAAGATGAGGATAAAATCTAG 1485 0.4377 MTDEQREPQASPSNGVHKLERKQIAERERSVFRGRRPRPGFSDSFSSVDLEALEIEEGSPRSQGSETPSSRASTSDSESQGSFAGTPNNNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNAASLDTEFGCFKSSWKNFTLAEIQAATDDFSHENLIGEGGYAEVYLGKLEDGNFVAIKRLTRGCQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWSLRYKIAMGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLTANNIKELVDPVLADAYDEEQMKLVTLTASLCVDQSSIQRPVMSQVLDILRGEEESLRIMKERSKSKLQRTYSEELLDAEEYNSTKFLSERDRHMETILGCSSSVTEDEDKI* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0845 494 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
Gso15g0845 494 Pfam Protein tyrosine and serine/threonine kinase 170 377 IPR001245 GO:0004672|GO:0006468
Gso15g0845 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Gso15g0845 494 PANTHER OS08G0249100 PROTEIN 33 470 - -
Gso15g0845 494 MobiDBLite consensus disorder prediction 1 90 - -
Gso15g0845 494 MobiDBLite consensus disorder prediction 19 36 - -
Gso15g0845 494 MobiDBLite consensus disorder prediction 60 90 - -
Gso15g0845 494 SMART serkin_6 167 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0845 494 SUPERFAMILY Protein kinase-like (PK-like) 152 450 IPR011009 -
Gso15g0845 494 Gene3D Transferase(Phosphotransferase) domain 1 244 458 - -
Gso15g0845 494 ProSiteProfiles Protein kinase domain profile. 167 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0845 494 Gene3D Phosphorylase Kinase; domain 1 133 241 - -
Gso15g0845 494 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 33 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0845 Gso-Chr15 7765964 7769667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0845 139 436 Receptor kinase-like Gene Family AT1G53420 39.216 1.83e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso15g0845 PK_Tyr_Ser-Thr 8.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0845 - - gmx:100776081 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0845 15 7765964 7769667 Gso11g2420 11 40219924 40223795 GST